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Hi,</div>
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You could also try to use the Matlab/Octave-function that I created for converting voxelized phantoms into Interfile or MetaImage files for GATE:</div>
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<a href="https://github.com/villekf/OMEGA/blob/master/source/Voxelized_phantom_handle.m" id="LPlnk609223">https://github.com/villekf/OMEGA/blob/master/source/Voxelized_phantom_handle.m</a></div>
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You'll need either <a href="https://github.com/villekf/OMEGA/blob/master/source/saveInterfile.m" id="LPlnk984354">
https://github.com/villekf/OMEGA/blob/master/source/saveInterfile.m</a> or <a href="https://github.com/villekf/OMEGA/blob/master/source/saveMetaImage.m" id="LPlnk">
https://github.com/villekf/OMEGA/blob/master/source/saveMetaImage.m</a> as well.</div>
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I have only used the XCAT/MOBY-phantoms so far so I'm not 100% sure that the Zubal phantom will work as well.<br>
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Regards,</div>
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Ville-Veikko Wettenhovi<br>
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<div id="divRplyFwdMsg" dir="ltr"><font face="Calibri, sans-serif" style="font-size:11pt" color="#000000"><b>From:</b> Gate-users <gate-users-bounces@lists.opengatecollaboration.org> on behalf of Eng. M Pharaon <pharaon_m@hotmail.com><br>
<b>Sent:</b> Monday, September 21, 2020 21:18<br>
<b>To:</b> Xinjie Cao <xinjie.cao@stonybrook.edu>; Hadi Rezaei <hrezaei.m.ph@gmail.com>; gate-users@lists.opengatecollaboration.org <gate-users@lists.opengatecollaboration.org><br>
<b>Subject:</b> Re: [Gate-users] How to use zubal phantom</font>
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<div dir="auto">Dear <span style="font-family:sans-serif">Xinjie</span>
<div><font face="sans-serif">Could you suggest for us a referance that could help us in learning how to edit and convert photos using Matlab because i am using imageJ and vv4D for that
</font></div>
<div><font face="sans-serif">Regards </font></div>
<div><font face="sans-serif">Eng. Pharaon<br>
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Sent from my Huawei phone</div>
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-------- Original message --------<br>
From: Xinjie Cao <xinjie.cao@stonybrook.edu><br>
Date: Mon, Sep 21, 2020, 9:01 PM<br>
To: Hadi Rezaei <hrezaei.m.ph@gmail.com>, gate-users@lists.opengatecollaboration.org<br>
Subject: Re: [Gate-users] How to use zubal phantom<br>
<blockquote>
<div dir="ltr">You can convert the .dat file into any format you need by MATLAB and then you could make conversion among different medical image formats (like .img, .nii, etc) using MedCon or ImageJ.
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<div>Best,</div>
<div>Xinjie</div>
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<div dir="ltr">On Sun, Sep 20, 2020 at 12:20 PM Hadi Rezaei <<a href="mailto:hrezaei.m.ph@gmail.com">hrezaei.m.ph@gmail.com</a>> wrote:<br>
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<blockquote>
<div dir="ltr">Dear gate users
<div>I want to use zubal phantom as a voxelized phantom. The data format that exists in </div>
<div><a href="https://eur03.safelinks.protection.outlook.com/?url=http%3A%2F%2Fnoodle.med.yale.edu%2Fzubal%2Fdata.htm&data=02%7C01%7C%7Cdd29f1b4e6724602c6d208d85e5ac23c%7C87879f2e73044bf2baf263e7f83f3c34%7C0%7C0%7C637363091194645601&sdata=%2FTDqUFOqcCX23jnoGrjjuM%2B00oDzG3mrPr71QTplhEY%3D&reserved=0" originalsrc="http://noodle.med.yale.edu/zubal/data.htm" shash="VV7z7geB6XfOWoIJ7O1tg2Ee4EOtV3eC0WGARricFa04nGicDwnUIxRPSzxjANGaTiSswAJ2GrM9ytJWxgor1jmo03CP7UXaO8HG8HdPKCRiY8F/C9oKJZjs8R9pNSGgqf5H26wnA9BYMxvofXHThTGIiaJwyiGtHA9zUoIDn+E=">http://noodle.med.yale.edu/zubal/data.htm</a>
link is .dat file. Should I convert it to .i33? and How can I do it?</div>
<div>Thanks<br>
</div>
<div>Best</div>
<div>Hadi</div>
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