<div dir="ltr">You should type ./jgs for some linux system. The "gjs>" is another system default command.<div><br></div><div>Best,</div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Wed, Jul 8, 2020 at 1:52 PM Hadi Rezaei <<a href="mailto:hrezaei.m.ph@gmail.com">hrezaei.m.ph@gmail.com</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div dir="ltr">Hi, <div>Thank you for responding.</div><div>after type gjs in terminal I get "gjs>".</div><div>Also, I installed gjs and gjm as follow:</div><div><pre style="overflow:auto hidden;font-family:Consolas,Menlo,"DejaVu Sans Mono","Bitstream Vera Sans Mono",monospace;font-size:0.9em;background:rgb(238,238,238);padding:7px 30px;margin-top:15px;margin-bottom:15px;line-height:1.3em;color:rgb(62,67,73)"><span style="color:rgb(0,0,0)">cd</span> <span style="color:rgb(0,0,0)">jobsplitter</span>
<span style="color:rgb(0,0,0)">make</span></pre><pre style="overflow:auto hidden;font-family:Consolas,Menlo,"DejaVu Sans Mono","Bitstream Vera Sans Mono",monospace;font-size:0.9em;background:rgb(238,238,238);padding:7px 30px;margin-top:15px;margin-bottom:15px;line-height:1.3em;color:rgb(62,67,73)"><span style="color:rgb(0,0,0)">
<pre style="overflow:auto hidden;font-family:Consolas,Menlo,"DejaVu Sans Mono","Bitstream Vera Sans Mono",monospace;font-size:0.9em;background-image:initial;background-position:initial;background-size:initial;background-repeat:initial;background-origin:initial;background-clip:initial;padding:7px 30px;margin-top:15px;margin-bottom:15px;line-height:1.3em;color:rgb(62,67,73)"><span style="color:rgb(0,0,0)">cd</span> <span style="color:rgb(0,0,0)">filemerger</span>
<span style="color:rgb(0,0,0)">make</span></pre>
</span></pre></div><div>Thank you.</div><div>Best,</div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Wed, Jul 8, 2020 at 7:17 PM Ville-Veikko Wettenhovi <<a href="mailto:ville-veikko.wettenhovi@uef.fi" target="_blank">ville-veikko.wettenhovi@uef.fi</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex">
<div dir="ltr">
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0);background-color:rgb(255,255,255)">
Hi,</div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0);background-color:rgb(255,255,255)">
<br>
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<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0);background-color:rgb(255,255,255)">
If you simply type gjs in terminal, what do you get? You may have the gjs-package installed (<a href="https://packages.ubuntu.com/focal/gjs" id="gmail-m_7068887562058322880gmail-m_-6673201964482323382LPlnk442175" target="_blank">https://packages.ubuntu.com/focal/gjs</a>) that probably takes precedence over the GATE gjs in which
case you need to call the GATE gjs with the full path.</div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0);background-color:rgb(255,255,255)">
<br>
</div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0);background-color:rgb(255,255,255)">
Regards,</div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0);background-color:rgb(255,255,255)">
Ville-Veikko Wettenhovi<br>
</div>
<div id="gmail-m_7068887562058322880gmail-m_-6673201964482323382appendonsend"></div>
<hr style="display:inline-block;width:98%">
<div id="gmail-m_7068887562058322880gmail-m_-6673201964482323382divRplyFwdMsg" dir="ltr"><font face="Calibri, sans-serif" style="font-size:11pt" color="#000000"><b>From:</b> Gate-users <<a href="mailto:gate-users-bounces@lists.opengatecollaboration.org" target="_blank">gate-users-bounces@lists.opengatecollaboration.org</a>> on behalf of Hadi Rezaei <<a href="mailto:hrezaei.m.ph@gmail.com" target="_blank">hrezaei.m.ph@gmail.com</a>><br>
<b>Sent:</b> Wednesday, July 8, 2020 14:48<br>
<b>To:</b> <a href="mailto:gate-users@lists.opengatecollaboration.org" target="_blank">gate-users@lists.opengatecollaboration.org</a> <<a href="mailto:gate-users@lists.opengatecollaboration.org" target="_blank">gate-users@lists.opengatecollaboration.org</a>><br>
<b>Subject:</b> [Gate-users] cluster run on GATE_v9</font>
<div> </div>
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<div dir="ltr">
<div>Dear all</div>
<div>I am trying to run cluster GATE_v9 but after type "gjs -numberofsplits 5 -clusterplatform openmosix -a /media/rezaei/Data/GATE_v9/gate/Gate/benchmarks/benchPET/HADI/example1.root ROOT_FILE example.mac" I found "<b>Unknown option -numberofsplits</b>"</div>
<div><br>
</div>
<div>I enter in .bashrc:</div>
<div>export GC_DOT_GATE_DIR=/media/rezaei/Data/GATE_v9/gate/Gate/benchmarks/benchPET/HADI<br>
export GC_GATE_EXE_DIR=/media/rezaei/Data/GATE_v9/gate/Gate/cluster_tools/jobsplitter/gjs</div>
<div>and also in mac file I added the command : /gate/cluster/setTimeSplitHalflife 6586.2 s</div>
<div>I used this link guidance step by step: </div>
<div>
<pre><a href="https://eur03.safelinks.protection.outlook.com/?url=https%3A%2F%2Fopengate.readthedocs.io%2Fen%2Flatest%2Fhow_to_use_gate_on_a_cluster.html&data=02%7C01%7C%7Cca0c08fe95894b5f3db908d82334d88b%7C87879f2e73044bf2baf263e7f83f3c34%7C0%7C1%7C637298057177827610&sdata=wF4%2FLi5cqR25mxsxk8wUU%2Fl5x%2BlndDfzkbYGudgbHGo%3D&reserved=0" target="_blank">https://opengate.readthedocs.io/en/latest/how_to_use_gate_on_a_cluster.html</a><br><br></pre>
<pre><span style="font-family:arial,sans-serif"><font size="2">How can I fix this problem?<br>any help will be highly appreciated. Thank you</font><br></span><br></pre>
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</blockquote></div>
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