<html><head></head><body><div style="color:#000; background-color:#fff; font-family:Helvetica Neue, Helvetica, Arial, Lucida Grande, sans-serif;font-size:16px"><div id="yui_3_16_0_ym19_1_1501662659013_4923">Hello Niels,</div><div id="yui_3_16_0_ym19_1_1501662659013_4924"><br></div><div id="yui_3_16_0_ym19_1_1501662659013_8195">What you describe, is one way to get dose that I haven't tried. There is another way to create a dosimetry simulation. <br></div><div id="yui_3_16_0_ym19_1_1501662659013_9858"><br></div><div id="yui_3_16_0_ym19_1_1501662659013_6531">I use the normal attachPhantomSD command in order to have interactions in the phantom (also for voxelized Phantoms) and then the ACTOR does the rest, for collecting dose. You can get the dose in .mhd format. (Check wiki-guide for details about actors)<br></div><div id="yui_3_16_0_ym19_1_1501662659013_9828"><br></div><div id="yui_3_16_0_ym19_1_1501662659013_9829">Kind regards,</div><div id="yui_3_16_0_ym19_1_1501662659013_9830">Konstantinos<br></div><div id="yui_3_16_0_ym19_1_1501662659013_4927"><span></span></div><div id="yui_3_16_0_ym19_1_1501662659013_4925"> </div><div class="signature" id="yui_3_16_0_ym19_1_1501662659013_14846"><div style="color:rgb(0, 0, 0);font-family:Arial;font-size:16px;font-style:normal;font-weight:normal;letter-spacing:normal;orphans:2;text-indent:0px;text-transform:none;white-space:normal;widows:2;word-spacing:0px;" id="yui_3_16_0_ym19_1_1501662659013_14845"><span style="font-style:italic;">-----------------------------------------------------</span></div><span style="color:rgb(0, 0, 0);font-family:Arial;font-size:16px;font-weight:normal;letter-spacing:normal;orphans:2;text-indent:0px;text-transform:none;white-space:normal;widows:2;word-spacing:0px;font-style:italic;"> Konstantinos Chatzipapas<br> Medical Physicist, </span><span style="color:rgb(0, 0, 0);font-family:Arial;font-size:16px;font-weight:normal;letter-spacing:normal;orphans:2;text-indent:0px;text-transform:none;white-space:normal;widows:2;word-spacing:0px;font-style:italic;">MSc<br></span><div style="color:rgb(0, 0, 0);font-family:Arial;font-size:16px;font-style:normal;font-weight:normal;letter-spacing:normal;orphans:2;text-indent:0px;text-transform:none;white-space:normal;widows:2;word-spacing:0px;" id="yui_3_16_0_ym19_1_1501662659013_14848"><div id="yui_3_16_0_ym19_1_1501662659013_14847"><span style="font-style:italic;"> <span style="font-weight:bold;">University of Patras</span></span></div><div id="yui_3_16_0_ym19_1_1501662659013_14850"><div id="yui_3_16_0_ym19_1_1501662659013_14849"><span style="font-style:italic;"><br></span></div><div id="yui_3_16_0_ym19_1_1501662659013_14853"><span style="font-style:italic;" id="yui_3_16_0_ym19_1_1501662659013_14852"><span class="Apple-tab-span" style="white-space:pre;"> </span> web page:<span class="Apple-converted-space"> </span><a rel="nofollow" target="_blank" href="http://www.physicsmag.com/" id="yui_3_16_0_ym19_1_1501662659013_14851">Physics Magazine</a></span></div></div></div></div> <div class="qtdSeparateBR"><br><br></div><div class="yahoo_quoted" style="display: block;"> <div style="font-family: Helvetica Neue, Helvetica, Arial, Lucida Grande, sans-serif; font-size: 16px;"> <div style="font-family: HelveticaNeue, Helvetica Neue, Helvetica, Arial, Lucida Grande, sans-serif; font-size: 16px;"> <div dir="ltr"><font size="2" face="Arial"> Στις 10:41 π.μ. Τετάρτη, 2 Αυγούστου 2017, ο/η Niels van der Werf <nrvdwerf@gmail.com> έγραψε:<br></font></div> <br><br> <div class="y_msg_container"><div id="yiv3976682937"><div>Dear GATE-users,<div class="yiv3976682937"><br class="yiv3976682937"></div><div class="yiv3976682937">Although my simulation is running very well in GATE, I cannot get any dose information with the attachVoxelPhantomSD command.</div><div class="yiv3976682937"><br class="yiv3976682937"></div><div class="yiv3976682937">Is there anyone with experience with this command? </div><div class="yiv3976682937"><br class="yiv3976682937"></div><div class="yiv3976682937">There aren’t any available working examples as far as I can see. I tried it in the same way as the manual describes:</div><div class="yiv3976682937"><br class="yiv3976682937"></div><div class="yiv3976682937"><pre style="font-family:monospace, Courier;background-color:rgb(249, 249, 249);border:1px solid rgb(221, 221, 221);padding:1em;white-space:pre-wrap;line-height:1.3em;font-size:14px;" class="yiv3976682937"># Create a simple phantom called CCD
/gate/world/daughters/name CCD
/gate/world/daughters/insert parameterizedBoxMatrix
# Read the file : a 300x300x1 array
/gate/CCD/geometry/insertReader image
/gate/CCD/imageReader/insertTranslator tabulated
/gate/CCD/imageReader/tabulatedTranslator/readTable ccdTable.dat
/gate/CCD/imageReader/readFile ccd300Phantom.dat
# Place the phantom and rotate it so that it is in the XZ plane
/gate/CCD/placement/setTranslation 0 -82.269 0 mm
/gate/CCD/placement/setRotationAxis 1 0 0
/gate/CCD/placement/setRotationAngle 90 deg
# Attach the phantom SD and the output module
/gate/CCD/attachVoxelPhantomSD
/gate/CCD/addOutput doseOutput
/gate/output/doseOutput/saveUncertainty true
/gate/output/doseOutput/setFileName ccdDose.bin</pre><div class="yiv3976682937">I hope someone can help me with this question!</div></div><div class="yiv3976682937"><br class="yiv3976682937"></div><div class="yiv3976682937">Best,</div><div class="yiv3976682937">Niels van der Werf</div></div></div>_______________________________________________<br>Gate-users mailing list<br><a ymailto="mailto:Gate-users@lists.opengatecollaboration.org" href="mailto:Gate-users@lists.opengatecollaboration.org">Gate-users@lists.opengatecollaboration.org</a><br><a href="http://lists.opengatecollaboration.org/mailman/listinfo/gate-users" target="_blank">http://lists.opengatecollaboration.org/mailman/listinfo/gate-users</a><br><br></div> </div> </div> </div></div></body></html>