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<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D;mso-fareast-language:EN-US">Hello
</span><span lang="EN-US" style="font-size:11.0pt;color:#1F497D">Yuncheng,<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D;mso-fareast-language:EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D;mso-fareast-language:EN-US">unfortunately I still do not have much more input concerning this problem… It seems Geant4 version related, that’s why is still working with an old version
of Gate as you pointed out. <o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D;mso-fareast-language:EN-US">If you want you can have a look at the following link for more info (thanks to David for the link)
<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D;mso-fareast-language:EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><a href="https://emea01.safelinks.protection.outlook.com/?url=http%3A%2F%2Ffismed.ciemat.es%2FGAMOS%2FGAMOS_doc%2FGAMOS.5.0.0%2Fx2711.html&data=02%7C01%7Calessio.elia%40medaustron.at%7C24c3948651604bdbe9e308d4c7561d79%7Cadb749e06dfd4f6fbea8cd9f8e0c9b89%7C0%7C0%7C636352620054471663&sdata=T7QFceLFfTpBnnnx2W3VZbzxJ5TP%2F6BkbgCKI3SynPI%3D&reserved=0"><span lang="EN-US">http://fismed.ciemat.es/GAMOS/GAMOS_doc/GAMOS.5.0.0/x2711.html</span></a><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D;mso-fareast-language:EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D;mso-fareast-language:EN-US">thanks for your feedback! We will update the examples.<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D;mso-fareast-language:EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D;mso-fareast-language:EN-US">Best<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D;mso-fareast-language:EN-US">Alessio<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D;mso-fareast-language:EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D;mso-fareast-language:EN-US"><o:p> </o:p></span></p>
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<p class="MsoNormal"><b><span lang="EN-US" style="font-size:11.0pt">From:</span></b><span lang="EN-US" style="font-size:11.0pt"> Yuncheng Zhong [mailto:Yuncheng.Zhong@UTSouthwestern.edu]
<br>
<b>Sent:</b> Freitag, 07. Juli 2017 19:45<br>
<b>To:</b> Elia Alessio <alessio.elia@medaustron.at><br>
<b>Cc:</b> gate-users@lists.opengatecollaboration.org<br>
<b>Subject:</b> RE: problem on secondary particle generation<o:p></o:p></span></p>
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<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D">Dear Alessio,<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D">It works with the modification! Thanks for your help.
<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D">It is interesting that I tried the same example1/ on a GATE v6.2, and it worked there with the C11[0.0] notation without problem.<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D">Best,<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D">Yuncheng<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D"><o:p> </o:p></span></p>
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<p class="MsoNormal"><b><span lang="EN-US" style="font-size:11.0pt">From:</span></b><span lang="EN-US" style="font-size:11.0pt"> Elia Alessio [<a href="mailto:alessio.elia@medaustron.at">mailto:alessio.elia@medaustron.at</a>]
<br>
<b>Sent:</b> Friday, July 07, 2017 6:54 AM<br>
<b>To:</b> Yuncheng Zhong <<a href="mailto:Yuncheng.Zhong@UTSouthwestern.edu">Yuncheng.Zhong@UTSouthwestern.edu</a>><br>
<b>Cc:</b> <a href="mailto:gate-users@lists.opengatecollaboration.org">gate-users@lists.opengatecollaboration.org</a><br>
<b>Subject:</b> RE: problem on secondary particle generation<o:p></o:p></span></p>
</div>
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<p class="MsoNormal"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;color:#1F497D">Dear Yuncheng<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;color:#1F497D"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D">The „problem“ is related to the filtering itself describe at line 115 of your main.mac file:
<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D">/gate/actor/carbonMap/particleFilter/addParticle C11[0.0]<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D">if you change this line with the following one
<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D">/gate/actor/carbonMap/particleFilter/addParticle C11<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D">you should get your wanted output for C11. Honestly, I am still not sure what those brackets are standing for…
<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D">I will come back to you with more input.
<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D">Hope it can help meanwhile!<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D">Cheers<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D">Alessio<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;color:#1F497D"><o:p> </o:p></span></p>
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<p class="MsoNormal"><b><span lang="EN-US" style="font-size:11.0pt">From:</span></b><span lang="EN-US" style="font-size:11.0pt"> Gate-users [<a href="mailto:gate-users-bounces@lists.opengatecollaboration.org">mailto:gate-users-bounces@lists.opengatecollaboration.org</a>]
<b>On Behalf Of </b>Yuncheng Zhong<br>
<b>Sent:</b> Freitag, 07. Juli 2017 00:51<br>
<b>To:</b> <a href="mailto:gate-users@lists.opengatecollaboration.org">gate-users@lists.opengatecollaboration.org</a><br>
<b>Subject:</b> [Gate-users] problem on secondary particle generation<o:p></o:p></span></p>
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<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal"><span lang="EN-US" style="font-family:"Times New Roman",serif">Dear All,<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-family:"Times New Roman",serif"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-family:"Times New Roman",serif">Maybe it has been addressed previously, I am wondering if anyone have successfully run the sample at example/example_Radiotherapy\example1. I tried it with both proton and carbon
as incident particles in the mac/main.mac file. Both times I had the energy data output, while the C11 files were all empty. The primary beam number was 1e5. The GATE version is 7.1.<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-family:"Times New Roman",serif"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-family:"Times New Roman",serif">How should I change the GATE code or the example1 code to make it produce secondary particles correctly?<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-family:"Times New Roman",serif"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-family:"Times New Roman",serif">Thanks!<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-family:"Times New Roman",serif"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-family:"Times New Roman",serif">Yuncheng<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-family:"Times New Roman",serif"><o:p> </o:p></span></p>
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