[Gate-users] dyld: Library not loaded - Gate first run (Thomas Baudier)

gabriele.birindelli at dbmr.unibe.ch gabriele.birindelli at dbmr.unibe.ch
Thu Oct 22 12:17:39 CEST 2020


Dear Thomas Baudier,


thank you very much.


Following the trick you suggested (https://github.com/OpenGATE/Gate/pull/304), I modified the CMakeList.txt and I recompiled and reinstalled Gate.


Now it works (or at least can be launched :-) )!


Thank you again.


Best regards,


Gabriele


________________________________
Da: Gate-users <gate-users-bounces at lists.opengatecollaboration.org> per conto di gate-users-request at lists.opengatecollaboration.org <gate-users-request at lists.opengatecollaboration.org>
Inviato: giovedì 22 ottobre 2020 11:26
A: gate-users at lists.opengatecollaboration.org
Oggetto: Gate-users Digest, Vol 173, Issue 29

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Today's Topics:

   1. Re: Gate-users Digest, Vol 173, Issue 27 (Nikolaos Chatzisavvas)
   2. Re: GATEv9.0 Scintillation Process is NOT working.(Solved)
      (Mathieu Dupont)
   3. dyld: Library not loaded - Gate first run
      (gabriele.birindelli at dbmr.unibe.ch)
   4. Re: dyld: Library not loaded - Gate first run (Thomas Baudier)


----------------------------------------------------------------------

Message: 1
Date: Thu, 22 Oct 2020 11:56:13 +0300
From: Nikolaos Chatzisavvas <nikolaos.chatzisavvas at gmail.com>
To: gate-users at lists.opengatecollaboration.org
Subject: Re: [Gate-users] Gate-users Digest, Vol 173, Issue 27
Message-ID:
        <CAF33i_a9SHLoYyrCCALnTFicVOBc4NcCx5yPVVME2cqMK7PD2A at mail.gmail.com>
Content-Type: text/plain; charset="utf-8"

Dear All i have made a video tutorial available on youtube on how to
install on Ubuntu 20.04 the Gatev9 :

Kindly access the information in the link below:

https://youtu.be/mwc8MNjP8pU



On Wed, Oct 21, 2020 at 1:23 PM <
gate-users-request at lists.opengatecollaboration.org> wrote:

> Send Gate-users mailing list submissions to
>         gate-users at lists.opengatecollaboration.org
>
> To subscribe or unsubscribe via the World Wide Web, visit
>         http://lists.opengatecollaboration.org/mailman/listinfo/gate-users
> or, via email, send a message with subject or body 'help' to
>         gate-users-request at lists.opengatecollaboration.org
>
> You can reach the person managing the list at
>         gate-users-owner at lists.opengatecollaboration.org
>
> When replying, please edit your Subject line so it is more specific
> than "Re: Contents of Gate-users digest..."
>
>
> Today's Topics:
>
>    1. GATE 9.0 installation guide for Ubuntu (Ali Ebrahimi)
>    2. GATE 9.0 installation guide (Ali Ebrahimi)
>
>
> ----------------------------------------------------------------------
>
> Message: 1
> Date: Tue, 20 Oct 2020 17:42:34 +0000 (UTC)
> From: Ali Ebrahimi <a.ebrahimi2008 at yahoo.com>
> To: "gate-users at lists.opengatecollaboration.org"
>         <gate-users at lists.opengatecollaboration.org>
> Subject: [Gate-users] GATE 9.0 installation guide for Ubuntu
> Message-ID: <933277457.1210108.1603215754611 at mail.yahoo.com>
> Content-Type: text/plain; charset="utf-8"
>
> Dear users,
>
> The GATE 5.0.0 installation guide for Ubuntu is available in the
> documentation part (http://opengatecollaboration.org/UsersGuide).
> How can I access the GATE 9.0 installation guide for Ubuntu?
> Is it like version 5.0.0?
> If no, can anyone send me the installation guide?
>
> Best regards,
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> ------------------------------
>
> Message: 2
> Date: Tue, 20 Oct 2020 17:45:03 +0000 (UTC)
> From: Ali Ebrahimi <a.ebrahimi2008 at yahoo.com>
> To: "gate-users at lists.opengatecollaboration.org"
>         <gate-users at lists.opengatecollaboration.org>
> Subject: [Gate-users] GATE 9.0 installation guide
> Message-ID: <1721200497.1216005.1603215903639 at mail.yahoo.com>
> Content-Type: text/plain; charset="utf-8"
>
> Dear users,
>
> The GATE 5.0.0 installation guide for Ubuntu is available in the
> documentation part (http://opengatecollaboration.org/UsersGuide).
>
> How can I access the GATE 9.0 installation guide for Ubuntu?
> Is it like version 5.0.0?
> If no, can anyone send me the installation guide?
>
> Best regards,
>
> AliEbrahimifardPh.D.Candidate of Medical Physics
> Department of Medical Physics
> Faculty of Medical SciencesTarbiat Modares UniversityPhone:
> +989378488852Gmail: aliebrahimifard128 at gmail.comEmail:
> aliebrahimifard at modares.ac.ir
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> End of Gate-users Digest, Vol 173, Issue 27
> *******************************************
>


--

Best Regards,

Nikolaos Chatzisavvas

PhD Candidate University of West Attica

tel:     0030 697 66 17 192

mail:    nikolaos.chatzisavvas at gmail.com
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Message: 2
Date: Thu, 22 Oct 2020 11:17:03 +0200
From: Mathieu Dupont <mdupont at cppm.in2p3.fr>
To: 강한규 <lovehangulp at naver.com>
Cc: GATE-users <Gate-users at lists.opengatecollaboration.org>
Subject: Re: [Gate-users] GATEv9.0 Scintillation Process is NOT
        working.(Solved)
Message-ID: <20201022111703.2de49a57 at marpixscan-fli.in2p3.fr>
Content-Type: text/plain; charset=UTF-8

Thx for your report,

The aim of my fix is to make scintillation working for the combination
 "GATEv9.0  (with my patch) + Geant4.10.06.p02 "

Can you test it, if you have time  ?



On Thu, 22 Oct 2020 16:52:32 +0900
강한규 <lovehangulp at naver.com> wrote:

> Dear Mathieu Dupont and GATE users,
>
> After downgrading the Geant4 version from Geant4.10.06.p02 to
> Geant4.9.05.p01, the scintillation process works in GATEv9.0
> (Attached file). (Before)GATEv9.0 + Geant4.10.06.p02 -> Scintillation
> Process does NOT work. (After) GATEv9.0 + Geant4.9.05.p01 ->
> Scintillation Process does work.
> You can find issue and fix on the following links of the GATE git hub.
> Issue: https://github.com/OpenGATE/Gate/issues/346
> Fix: https://github.com/OpenGATE/Gate/pull/368
>
> Thanks Mathieu Dupont for your good advice.
>
> Best regards,
>
> Han Gyu Kang
>
>
> --------Han Gyu Kang, Ph.D, Researcher
>
> National Institute of Radiological Sciences (NIRS)
> National Institutes for Quantum and Radiological Science and
> Technology (QST) 4-9-1 Anagawa, Inage-ku, Chiba 263-8555, JAPAN
>
> -----Original Message-----
> From: "강한규"<lovehangulp at naver.com>
> To: "GATE-users"<Gate-users at lists.opengatecollaboration.org>;
> Cc:
> Sent: 2020-06-08 (월) 20:20:02 (GMT+09:00)
> Subject: [Gate-users] GATEv9.0 Scintillation Process is NOT working.
>
> Dear GATE users,
>
> Is there anyone who checked the scintillation process in GATEv9.0?
>
> I installed GATEv9.0 on my Ubuntu Linux PC.
> Of course, the "GATE_USE_OPTICAL" option was turned ON during the
> installation. After GATE installation, I checked that everything
> works fine except the scintillation process.
> The optical.mac in the benchImaging folder is working well as it uses
> "opticalphoton" as a source. I checked that Cerenkov process is also
> working well.
> However, "Scintillation Process" is NOT working in GATEv9.0 optical
> simulation. If there is anyone who succeeded in scintillation process
> in GATEv9.0, please let me know.
> Best regards,
>
> Han Gyu Kang
>
> --------Han Gyu Kang, Ph.D, Researcher
>
> National Institute of Radiological Sciences (NIRS)
> National Institutes for Quantum and Radiological Science and
> Technology (QST) 4-9-1 Anagawa, Inage-ku, Chiba 263-8555, JAPAN
>
>
>



--
Démobilisé contre la réforme des retraites et la LPPR
--
Mathieu Dupont - Ingénieur de Recherche
CENTRE DE PHYSIQUE DES PARTICULES DE MARSEILLE
UMR 7346 - Aix-Marseille Université - CNRS/IN2P3
163 avenue de Luminy, Case 902, F -13288 Marseille CEDEX 09
Tél.: +33 (0) 4 91 82 72 19
Site : cppm.in2p3.fr - Email : mdupont at cppm.in2p3.fr


------------------------------

Message: 3
Date: Thu, 22 Oct 2020 09:32:02 +0000
From: <gabriele.birindelli at dbmr.unibe.ch>
To: <gate-users at lists.opengatecollaboration.org>
Subject: [Gate-users] dyld: Library not loaded - Gate first run
Message-ID: <dcf4b4779a054867be768a5b1f16d3e1 at dbmr.unibe.ch>
Content-Type: text/plain; charset="iso-8859-1"

Dear GATE users,


I'm new in Gate and I want to run it on my OSX Catalina.


The installation has been completed successfully but when I run Gate I obtain:


dyld: Library not loaded: @rpath/libG4Tree.dylib
  Referenced from: /Users/gabriele/MC/gate_v9.0-install/bin/Gate
  Reason: image not found
zsh: abort      Gate

Do you have any suggestion to solve this problem?


Thank you in advance.


Best regards,

Gabriele Birindelli
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Message: 4
Date: Thu, 22 Oct 2020 11:49:06 +0200
From: Thomas Baudier <thomas.baudier at creatis.insa-lyon.fr>
To: gate-users at lists.opengatecollaboration.org
Subject: Re: [Gate-users] dyld: Library not loaded - Gate first run
Message-ID:
        <71decb95-57a6-d2f1-993d-4c5ca11866c3 at creatis.insa-lyon.fr>
Content-Type: text/plain; charset="windows-1252"; Format="flowed"



On 22/10/2020 11:37, Thomas Baudier wrote:
> Hi Gabriele,
>
> I suggest a problem related to this commit:
> https://github.com/OpenGATE/Gate/pull/304
>
> After you compiled Gzte, did you installed Gate or not (whith "make
> install") ?
> If you installed it, can you try without installation please ?
>
> Thank you
> Thomas
>
> On 22/10/2020 11:32, gabriele.birindelli at dbmr.unibe.ch wrote:
>>
>> Dear GATE users,
>>
>>
>> I'm new in Gate and I want to run it on my OSX Catalina.
>>
>>
>> The installation has been completed successfully but when I run Gate
>> I obtain:
>>
>>
>> dyld: Library not loaded: @rpath/libG4Tree.dylib
>>   Referenced from: /Users/gabriele/MC/gate_v9.0-install/bin/Gate
>>   Reason: image not found
>> zsh: abort      Gate
>>
>> Do you have any suggestion to solve this problem?
>>
>>
>> Thank you in advance.
>>
>>
>> Best regards,
>>
>> Gabriele Birindelli
>>
>>
>> _______________________________________________
>> Gate-users mailing list
>> Gate-users at lists.opengatecollaboration.org
>> http://lists.opengatecollaboration.org/mailman/listinfo/gate-users
>

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