<div dir="ltr">


        
        
        
        


<p><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">Hi
David,</font></font></p>
<p><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">* I
downloaded cmake (tar.gz archive) from <a href="https://cmake.org/download/" target="_blank">https://cmake.org/download/</a></font></font></p>
<p><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">Installing
of cmake was following:</font></font></p>
<p><code class="gmail-western"><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">tar
xf cmake-3.5.2.tar.gz</font></font></code></p>
<p><code class="gmail-western"><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">cd
cmake-3.5.2</font></font></code></p>
<p><code class="gmail-western"><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">./configure</font></font></code></p>
<p><code class="gmail-western"><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">make</font></font></code></p>
<p><code class="gmail-western"><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">sudo
make install</font></font></code></p>
<p><code class="gmail-western"><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">I
took this instruction from
<a href="http://askubuntu.com/questions/610291/how-to-install-cmake-3-2-on-ubuntu-14-04" target="_blank">http://askubuntu.com/questions/610291/how-to-install-cmake-3-2-on-ubuntu-14-04</a></font></font></code></p>
<p><code class="gmail-western"><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">* Installing
of ccmake:</font></font></code></p>
<p><code class="gmail-western"><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">sudo
apt-get install cmake-curses-gui</font></font></code></p>
<p><code class="gmail-western"><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">I
took this instruction from
<a href="http://askubuntu.com/questions/121797/how-do-i-install-ccmake" target="_blank">http://askubuntu.com/questions/121797/how-do-i-install-ccmake</a></font></font></code></p>
<p><code class="gmail-western"><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">*I
downloaded root_v5.34.36.Linux-ubuntu14-x86_64-gcc4.8.tar.gz from
<a href="https://root.cern.ch/content/release-53436" target="_blank">https://root.cern.ch/content/release-53436</a></font></font></code></p>
<p><code class="gmail-western"><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">Installing
of ROOT:</font></font></code></p>
<p><code class="gmail-western"><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">tar
-xzf root_v5.34.36.Linux-ubuntu14-x86_64-gcc4.8.tar.gz</font></font></code></p>
<p><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">mv
root root_v5.34</font></font></p>
<p><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">source
/home/elnur/Programs/root_v5.34/bin/thisroot.sh</font></font></p>
<p><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">This
instruction was taken from
<a href="http://wiki.opengatecollaboration.org/index.php/Compilation_Instructions_V7.1#ROOT" target="_blank">http://wiki.opengatecollaboration.org/index.php/Compilation_Instructions_V7.1#ROOT</a></font></font></p>
<p><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">*
I've done sudo apt-get install libssl-dev and got the following:</font></font></p>
<p><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">elnur@elnur-System-Product-Name:~$
sudo apt-get install libssl-dev</font></font></p>
<p><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">[sudo]
password for elnur: </font></font>
</p>
<p><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">Reading
package lists... Done</font></font></p>
<p><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">Building
dependency tree       </font></font>
</p>
<p><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">Reading
state information... Done</font></font></p>
<p><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">libssl-dev
is already the newest version.</font></font></p>
<p><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">libssl-dev
set to manually installed.</font></font></p>
<p><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">The
following packages were automatically installed and are no longer
required:</font></font></p>
<p>  <font face="Times New Roman, serif"><font style="font-size:14pt" size="4">linux-headers-4.4.0-31
linux-headers-4.4.0-31-generic</font></font></p>
<p>  <font face="Times New Roman, serif"><font style="font-size:14pt" size="4">linux-image-4.4.0-31-generic
linux-image-extra-4.4.0-31-generic</font></font></p>
<p><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">Use
'apt-get autoremove' to remove them.</font></font></p>
<p><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">0
upgraded, 0 newly installed, 0 to remove and 0 not upgraded.</font></font></p>
<p><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">Thus
this package has already been installed.</font></font></p>
<p><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">*
root-config --libs   gives the next result: </font></font>
</p>
<p><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">elnur@elnur-System-Product-Name:~$
root-config --libs</font></font></p>
<p><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">-L/home/elnur/Programs/root_v5.34/lib
-lCore -lCint -lRIO -lNet -lHist -lGraf -lGraf3d -lGpad -lTree -lRint
-lPostscript -lMatrix -lPhysics -lMathCore -lThread -pthread -lm -ldl
-rdynamic</font></font></p>
<p><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">Sorry
for so late answer. This is because I didn't have any opportunity to
check all things which are mentioned above because I was far from
work for several days.</font></font></p>
<p><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">Please
tell me what can I try yet.</font></font></p>
<p><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">Thank
you very much!</font></font></p>
<p><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">Best
regards,</font></font></p>
<p><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">Elnur</font></font></p>
<p><font face="Times New Roman, serif"><font style="font-size:14pt" size="4">P.S.
I've resent this letter one more time because the previous variant of
it had very small font size.</font></font></p><div class="gmail_extra"><div class="gmail_quote">2016-12-19 17:11 GMT+03:00 David Boersma <span dir="ltr"><<a href="mailto:david.boersma@physics.uu.se" target="_blank">david.boersma@physics.uu.se</a>></span>:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Hi Elnur,<br>
<br>
Not using the latest version is often a good strategy to get a mature, bug-fixed version of a product. But that only works with releases that are maintained and which get bugfix-releases over time. That would be nice but it requires more manpower than we have available in the GATE collaboration. When we find a bug, then we only fix it in the development version on github, and only the next release will contain the bugfix.<br>
<br>
Maybe we will some day change our policy, when we get more people helping out with development & maintenance, so that bugfixes can be backported. The release of 7.1 would be called 7.1.0 instead. And if during development of new features for for 7.2, 7.3 etc we find some bug that also affects 7.1, then we would fix it also in the 7.1 code and make a "bugfix release" of 7.1, call it 7.1.1, 7.1.2, etc. The higher the last number, the more stable.<br>
<br>
But that is not how we work now. Bugfixes are only in the newest version, so if that was your motivation, then you'd better use the latest release.<br>
<br>
You should never do "unset PATH". I am sorry that I was unclear about that. The PATH variable contains the list of directories where executable programs should be found corresponding to the commands that you type in the shell. If you "unset PATH" then it is empty, undefined, so the shell cannot find any commands (except the "builtin" shell commands, such as "export" and "source" and a few others).<br>
<br>
You did eventually the right thing, namely remove the line from .bashrc that adds matlab to your PATH. Unfortunately you still get that weird linking error. (It is really a silly error, because as far as I know we are not using any libNet.so or SSL functionality at all in Gate.) It could be due to inconsistent cmake/ccmake installs, or (more likely) a faulty ROOT install, or something else entirely.<br>
<br>
How did you install cmake and ccmake? Did you compile them from source or did you use a package manager? When I built cmake from source, the "make install" step also installed a corresponding ccmake version (this requires the "devel" package the "curses" or "ncurses" library to be on my system), so I did not install ccmake separately.<br>
<br>
How did you install ROOT? A binary tarball, a source tarball (compile from source), or with a package manager? If from a binary tarball then maybe you just need to "sudo apt-get install libssl-dev" (this should install libssl.so on your system) and try again. (With the other two options you should have already gotten into trouble when building/installing ROOT, way before installing Gate.) If that does not help, could you check if this command mentions any ssl linking:<br>
<br>
root-config --libs<br>
<br>
HTH,<br>
David B.<br>
<br>
<br>
Den 19/12/2016 kl. 13:40, skrev Elnur Sadihov:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
I don't understand what happened after the command 'unset PATH', but I<br>
just closed terminal and opened it again - basic commands work again.<br>
Below there are additional lines with 'export' and 'source', which are<br>
written in my .bashrc:<br>
<br>
export PATH=$PATH:/usr/local/MATLAB/R<wbr>2014b/bin/glnxa64<br>
<br>
export LD_PRELOAD='/usr/$LIB/libstdc+<wbr>+.so.6'<br>
export DISPLAY=:0<br>
<br>
export PATH=$PATH:/home/elnur/Program<wbr>s/2.2.0.4-install/bin<br>
export PATH=$PATH:/home/elnur/Program<wbr>s/2.2.0.4-install/include<br>
export<br>
LD_LIBRARY_PATH=$LD_LIBRARY_PA<wbr>TH:/home/elnur/Programs/<a href="http://2.2.0.">2.2.0.</a><wbr>4-install/lib<br>
<br>
source /home/elnur/Programs/root_v5.3<wbr>4/bin/thisroot.sh<br>
source /home/elnur/Programs/geant4.10<wbr>.01.p03-install/bin/geant4.sh<br>
<br>
export<br>
LD_LIBRARY_PATH=$LD_LIBRARY_PA<wbr>TH:/home/elnur/Programs/lmf_v3<wbr>.0/lib/Linux-g++<br>
<br>
#export LD_LIBRARY_PATH=$LD_LIBRARY_PA<wbr>TH:/usr/lib/x86_64-linux-gnu<br>
<br>
I run 'printenv | grep -i matlab':<br>
<br>
elnur@elnur-System-Product-Nam<wbr>e:~$ printenv | grep -i matlab<br>
PATH=/home/elnur/Programs/gean<wbr>t4.10.01.p03-install/bin:/home<wbr>/elnur/Programs/root_v5.34/<wbr>bin:/usr/local/sbin:/usr/local<wbr>/bin:/usr/sbin:/usr/bin:/sbin:<wbr>/bin:/usr/games:/usr/local/<wbr>games:/home/elnur/Programs/2.<wbr>2.0.4-install/bin:/home/elnur/<wbr>Programs/2.2.0.4-install/<wbr>include:/usr/local/MATLAB/<wbr>R2014b/bin/glnxa64<br>
<br>
Now I commented the line 'export<br>
PATH=$PATH:/usr/local/MATLAB/R<wbr>2014b/bin/glnxa64' in .bashrc.<br>
After reopening terminal the command 'printenv | grep -i matlab' doesn't<br>
give anything, as it has to be.<br>
<br>
I run 'ccmake ../gate_v7.1' and this time I turned off options 'Download<br>
benchmarks data' and 'Download examples data'. Then I run 'make -j4' and<br>
again got the same error. Below there is a log:<br>
<br>
------------------------------<wbr>------------------------------<wbr>------------------------------<wbr>------------------------------<wbr>----------<br>
elnur@elnur-System-Product-Nam<wbr>e:~/Programs/gate_v7.1-build$ make -j4<br>
Scanning dependencies of target itkzlib<br>
Scanning dependencies of target MetaIO<br>
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[ 98%] Building CXX object<br>
CMakeFiles/Gate.dir/source/gen<wbr>eral/src/GateFakeRunManager.<wbr>cc.o<br>
[ 98%] Building CXX object<br>
CMakeFiles/Gate.dir/source/gen<wbr>eral/src/GateRootDefs.cc.o<br>
[ 99%] Building CXX object<br>
CMakeFiles/Gate.dir/source/gen<wbr>eral/src/GateAngleFilter.cc.o<br>
[ 99%] [ 99%] Building CXX object<br>
CMakeFiles/Gate.dir/source/ext<wbr>ernals/clhep/src/CLHEP/Matrix/<wbr>SymMatrix.cc.o<br>
Building CXX object<br>
CMakeFiles/Gate.dir/source/ext<wbr>ernals/clhep/src/CLHEP/Matrix/<wbr>Vector.cc.o<br>
[ 99%] Building CXX object<br>
CMakeFiles/Gate.dir/source/ext<wbr>ernals/clhep/src/CLHEP/Matrix/<wbr>DiagMatrix.cc.o<br>
[ 99%] Building CXX object<br>
CMakeFiles/Gate.dir/source/ext<wbr>ernals/clhep/src/CLHEP/Matrix/<wbr>SymMatrixInvert.cc.o<br>
[ 99%] Building CXX object<br>
CMakeFiles/Gate.dir/source/ext<wbr>ernals/clhep/src/CLHEP/Matrix/<wbr>MatrixLinear.cc.o<br>
[ 99%] Building CXX object<br>
CMakeFiles/Gate.dir/source/ext<wbr>ernals/clhep/src/CLHEP/Matrix/<wbr>GenMatrix.cc.o<br>
[100%] Building CXX object<br>
CMakeFiles/Gate.dir/source/ext<wbr>ernals/clhep/src/CLHEP/Matrix/<wbr>Matrix.cc.o<br>
[100%] Building CXX object<br>
CMakeFiles/Gate.dir/source/ext<wbr>ernals/clhep/src/CLHEP/Matrix/<wbr>MatrixInvert.cc.o<br>
[100%] Building CXX object<br>
CMakeFiles/Gate.dir/source/ext<wbr>ernals/clhep/src/CLHEP/RandomO<wbr>bjects/RandomVector.cc.o<br>
[100%] Building CXX object<br>
CMakeFiles/Gate.dir/source/ext<wbr>ernals/clhep/src/CLHEP/RandomO<wbr>bjects/RandMultiGauss.cc.o<br>
Linking CXX executable Gate<br>
/home/elnur/Programs/root_v5.3<wbr>4/lib/libNet.so: undefined reference to<br>
`SSL_CTX_free@OPENSSL_1.0.0'<br>
/home/elnur/Programs/root_v5.3<wbr>4/lib/libNet.so: undefined reference to<br>
`SSL_CTX_use_certificate_chain<wbr>_file@OPENSSL_1.0.0'<br>
/home/elnur/Programs/root_v5.3<wbr>4/lib/libNet.so: undefined reference to<br>
`SSL_get_error@OPENSSL_1.0.0'<br>
/home/elnur/Programs/root_v5.3<wbr>4/lib/libNet.so: undefined reference to<br>
`SSL_CTX_use_PrivateKey_file@O<wbr>PENSSL_1.0.0'<br>
/home/elnur/Programs/root_v5.3<wbr>4/lib/libNet.so: undefined reference to<br>
`EVP_sha1@OPENSSL_1.0.0'<br>
/home/elnur/Programs/root_v5.3<wbr>4/lib/libNet.so: undefined reference to<br>
`SSL_read@OPENSSL_1.0.0'<br>
/home/elnur/Programs/root_v5.3<wbr>4/lib/libNet.so: undefined reference to<br>
`SSL_set_quiet_shutdown@OPENSS<wbr>L_1.0.0'<br>
/home/elnur/Programs/root_v5.3<wbr>4/lib/libNet.so: undefined reference to<br>
`SSLv23_method@OPENSSL_1.0.0'<br>
/home/elnur/Programs/root_v5.3<wbr>4/lib/libNet.so: undefined reference to<br>
`SSL_CTX_new@OPENSSL_1.0.0'<br>
/home/elnur/Programs/root_v5.3<wbr>4/lib/libNet.so: undefined reference to<br>
`SSL_peek@OPENSSL_1.0.0'<br>
/home/elnur/Programs/root_v5.3<wbr>4/lib/libNet.so: undefined reference to<br>
`SSL_new@OPENSSL_1.0.0'<br>
/home/elnur/Programs/root_v5.3<wbr>4/lib/libNet.so: undefined reference to<br>
`HMAC@OPENSSL_1.0.0'<br>
/home/elnur/Programs/root_v5.3<wbr>4/lib/libNet.so: undefined reference to<br>
`SSL_write@OPENSSL_1.0.0'<br>
/home/elnur/Programs/root_v5.3<wbr>4/lib/libNet.so: undefined reference to<br>
`SSL_CTX_load_verify_locations<wbr>@OPENSSL_1.0.0'<br>
/home/elnur/Programs/root_v5.3<wbr>4/lib/libNet.so: undefined reference to<br>
`SSL_free@OPENSSL_1.0.0'<br>
/home/elnur/Programs/root_v5.3<wbr>4/lib/libNet.so: undefined reference to<br>
`SSL_set_fd@OPENSSL_1.0.0'<br>
/home/elnur/Programs/root_v5.3<wbr>4/lib/libNet.so: undefined reference to<br>
`SSL_connect@OPENSSL_1.0.0'<br>
/home/elnur/Programs/root_v5.3<wbr>4/lib/libNet.so: undefined reference to<br>
`SSL_library_init@OPENSSL_1.0.<wbr>0'<br>
/home/elnur/Programs/root_v5.3<wbr>4/lib/libNet.so: undefined reference to<br>
`SSL_shutdown@OPENSSL_1.0.0'<br>
collect2: error: ld returned 1 exit status<br>
make[2]: *** [Gate] Error 1<br>
make[1]: *** [CMakeFiles/Gate.dir/all] Error 2<br>
make: *** [all] Error 2<br>
<br>
------------------------------<wbr>------------------------------<wbr>------------------------------<wbr>------------------------------<wbr>------------------------<br>
<br>
Best regards,<br>
Elnur<br>
<br>
2016-12-19 13:40 GMT+03:00 David Boersma <<a href="mailto:david.boersma@physics.uu.se" target="_blank">david.boersma@physics.uu.se</a><br>
<mailto:<a href="mailto:david.boersma@physics.uu.se" target="_blank">david.boersma@physics.<wbr>uu.se</a>>>:<br>
<br>
    Hi Elnur,<br>
<br>
    Just for my curiosity, why do you prefer the 7.1 release over the<br>
    latest 7.2 release?<br>
<br>
    Thanks for explicitly listing all relevant versions and a full build<br>
    log! I have some random hints and remarks that may hopefully be some<br>
    first steps in solving your problem.<br>
<br>
    * cmake/ccmake versions are different, that is weird. The ccmake<br>
    program is just an interactive UI wrapper around cmake and it should<br>
    report the same version. If not, then something may be wrong funny<br>
    with your shell environment, in particular the PATH variable. How<br>
    did you determine these versions? Is that the package version<br>
    number, or the output of "cmake --version" and "ccmake --version"?<br>
    The latter is the most important.<br>
<br>
    * The cmake warnings mention MATLAB directories. You do not need<br>
    MATLAB for building GATE, so I think you can silence these warnings<br>
    by removing /usr/local/MATLAB/R2014b/bin from your PATH and maybe<br>
    other variables. If you are on a system where you manage your shell<br>
    environment with the "module" command, then something like "module<br>
    remove matlab" should help. Otherwise run something like "printenv |<br>
    grep -i matlab" to check which shell variables need adjustment<br>
    ("export VARNAME=NEWVALUE" or "unset VARNAME").<br>
<br>
    * As far as I can see, "make -j4" step results in two fatal errors<br>
    (out of a possible four!), one regarding a download failure and one<br>
    about SSL linking problems with a ROOT shared library. The first one<br>
    may be solved by running make one more time, or by downloading the<br>
    problematic test file by hand. The second one seems to indicate that<br>
    something might be wrong with your ROOT installation. It is also<br>
    possible that the MATLAB things in your environment are interfering<br>
    destructively with the ROOT linking, so try that first.<br>
<br>
    Hope that helps a bit,<br>
    David Boersma<br>
<br>
<br>
    Den 19/12/2016 kl. 09:00, skrev Elnur Sadihov:<br>
<br>
        Hello everyone,<br>
<br>
        I'm trying to install Gate_v7.1 on Ubuntu 14.04 LTS.<br>
        Installed packages:<br>
        cmake 3.6.1<br>
        ccmake 2.8.12.2<br>
        CLHEP 2.2.0.4<br>
        root 5.34<br>
        geant4.10.01.p03<br>
<br>
<br>
        I follow compilation instructions<br>
        <a href="http://wiki.opengatecollaboration.org/index.php/Compilation_Instructions_V7.1" rel="noreferrer" target="_blank">http://wiki.opengatecollaborat<wbr>ion.org/index.php/Compilation_<wbr>Instructions_V7.1</a><br>
        <<a href="http://wiki.opengatecollaboration.org/index.php/Compilation_Instructions_V7.1" rel="noreferrer" target="_blank">http://wiki.opengatecollabora<wbr>tion.org/index.php/<wbr>Compilation_Instructions_V7.1</a>><br>
<br>
        After configuring Gate_v.7.1 I press 'g' to generate the compilation<br>
        environment. But Warning appears:<br>
<br>
         CMake Warning at CMakeLists.txt:195 (ADD_EXECUTABLE):<br>
           Cannot generate a safe runtime search path for target Gate<br>
        because<br>
        files in<br>
           some directories may conflict with libraries in implicit<br>
        directories:<br>
<br>
             runtime library [libQtOpenGL.so.4] in<br>
        /usr/lib/x86_64-linux-gnu may be<br>
         hidden by files in:<br>
               /usr/local/MATLAB/R2014b/bin/<wbr>glnxa64<br>
             runtime library [libQtGui.so.4] in<br>
        /usr/lib/x86_64-linux-gnu may be<br>
         hidden by files in:<br>
               /usr/local/MATLAB/R2014b/bin/<wbr>glnxa64<br>
             runtime library [libQtCore.so.4] in<br>
        /usr/lib/x86_64-linux-gnu may be<br>
         hidden by files in:<br>
               /usr/local/MATLAB/R2014b/bin/<wbr>glnxa64<br>
<br>
           Some of these libraries may not be found correctly.<br>
<br>
        Then I run command 'make -j4' and it finally gives the error. Below<br>
        there is a log:<br>
<br>
        Scanning dependencies of target itkzlib<br>
        Scanning dependencies of target GateBenchmarkData<br>
        Scanning dependencies of target GateExampleData<br>
        Scanning dependencies of target MetaIO<br>
        [  0%] Generating<br>
        /home/elnur/Programs/gate_v7.1<wbr>/benchmarks/benchPET/benchPET.<wbr>pdf<br>
        [  0%] Generating<br>
        /home/elnur/Programs/gate_v7.1<wbr>/examples/example_TimeActivity<wbr>Curve/TAC_Example.png<br>
        -- Fetching<br>
        "<a href="http://midas3.kitware.com/midas/api/rest?method=midas.bitstream.download&checksum=0a63785ee8d79c3031523f20c0b7c4cc&algorithm=MD5" rel="noreferrer" target="_blank">http://midas3.kitware.com/mid<wbr>as/api/rest?method=midas.bitst<wbr>ream.download&checksum=0a63785<wbr>ee8d79c3031523f20c0b7c4cc&<wbr>algorithm=MD5</a><br>
        <<a href="http://midas3.kitware.com/midas/api/rest?method=midas.bitstream.download&checksum=0a63785ee8d79c3031523f20c0b7c4cc&algorithm=MD5" rel="noreferrer" target="_blank">http://midas3.kitware.com/mid<wbr>as/api/rest?method=midas.bitst<wbr>ream.download&checksum=0a63785<wbr>ee8d79c3031523f20c0b7c4cc&<wbr>algorithm=MD5</a>>"<br>
        -- Fetching<br>
        "<a href="http://midas3.kitware.com/midas/api/rest?method=midas.bitstream.download&checksum=35a91d8d91d208cf300cfe02c41f0899&algorithm=MD5" rel="noreferrer" target="_blank">http://midas3.kitware.com/mid<wbr>as/api/rest?method=midas.bitst<wbr>ream.download&checksum=35a91d8<wbr>d91d208cf300cfe02c41f0899&<wbr>algorithm=MD5</a><br>
        <<a href="http://midas3.kitware.com/midas/api/rest?method=midas.bitstream.download&checksum=35a91d8d91d208cf300cfe02c41f0899&algorithm=MD5" rel="noreferrer" target="_blank">http://midas3.kitware.com/mid<wbr>as/api/rest?method=midas.bitst<wbr>ream.download&checksum=35a91d8<wbr>d91d208cf300cfe02c41f0899&<wbr>algorithm=MD5</a>>"<br>
        [  0%] Building C object<br>
        itk-mhd/itkzlib/CMakeFiles/itk<wbr>zlib.dir/adler32.o<br>
        [  1%] Building CXX object<br>
        itk-mhd/MetaIO/CMakeFiles/Meta<wbr>IO.dir/metaUtils.o<br>
        [  1%] Building C object<br>
        itk-mhd/itkzlib/CMakeFiles/itk<wbr>zlib.dir/compress.o<br>
        [  1%] Building C object<br>
        itk-mhd/itkzlib/CMakeFiles/itk<wbr>zlib.dir/crc32.o<br>
        -- [download 100% complete]<br>
        -- [download 100% complete]<br>
        [  2%] Building C object<br>
        itk-mhd/itkzlib/CMakeFiles/itk<wbr>zlib.dir/deflate.o<br>
        [  2%] Building C object<br>
        itk-mhd/itkzlib/CMakeFiles/itk<wbr>zlib.dir/gzio.o<br>
        -- [download 0% complete]<br>
        -- [download 52% complete]<br>
        -- [download 0% complete]<br>
        -- [download 100% complete]<br>
        -- Downloaded object:<br>
        "/home/elnur/Programs/gate_v7.<wbr>1-build/ExternalData/Objects/M<wbr>D5/35a91d8d91d208cf300cfe02c41<wbr>f0899"<br>
        [  2%] Generating<br>
        /home/elnur/Programs/gate_v7.1<wbr>/benchmarks/benchPET/benchmark<wbr>PET-GATE-Reference.gif<br>
        -- Fetching<br>
        "<a href="http://midas3.kitware.com/midas/api/rest?method=midas.bitstream.download&checksum=d84562b93ae060451f5b5554f7dda606&algorithm=MD5" rel="noreferrer" target="_blank">http://midas3.kitware.com/mid<wbr>as/api/rest?method=midas.bitst<wbr>ream.download&checksum=d84562b<wbr>93ae060451f5b5554f7dda606&<wbr>algorithm=MD5</a><br>
        <<a href="http://midas3.kitware.com/midas/api/rest?method=midas.bitstream.download&checksum=d84562b93ae060451f5b5554f7dda606&algorithm=MD5" rel="noreferrer" target="_blank">http://midas3.kitware.com/mid<wbr>as/api/rest?method=midas.bitst<wbr>ream.download&checksum=d84562b<wbr>93ae060451f5b5554f7dda606&<wbr>algorithm=MD5</a>>"<br>
        [  2%] -- [download 100% complete]<br>
        Building C object itk-mhd/itkzlib/CMakeFiles/itk<wbr>zlib.dir/inffast.o<br>
        -- Downloaded object:<br>
        "/home/elnur/Programs/gate_v7.<wbr>1-build/ExternalData/Objects/M<wbr>D5/0a63785ee8d79c3031523f20c0b<wbr>7c4cc"<br>
        [  2%] Generating<br>
        /home/elnur/Programs/gate_v7.1<wbr>/examples/example_TimeActivity<wbr>Curve/data/NCAT_act_1.bin<br>
        -- Fetching<br>
        "<a href="http://midas3.kitware.com/midas/api/rest?method=midas.bitstream.download&checksum=730355e81d3c478e92b09f3764f126c4&algorithm=MD5" rel="noreferrer" target="_blank">http://midas3.kitware.com/mid<wbr>as/api/rest?method=midas.bitst<wbr>ream.download&checksum=730355e<wbr>81d3c478e92b09f3764f126c4&<wbr>algorithm=MD5</a><br>
        <<a href="http://midas3.kitware.com/midas/api/rest?method=midas.bitstream.download&checksum=730355e81d3c478e92b09f3764f126c4&algorithm=MD5" rel="noreferrer" target="_blank">http://midas3.kitware.com/mid<wbr>as/api/rest?method=midas.bitst<wbr>ream.download&checksum=730355e<wbr>81d3c478e92b09f3764f126c4&<wbr>algorithm=MD5</a>>"<br>
        [  2%] Building C object<br>
        itk-mhd/itkzlib/CMakeFiles/itk<wbr>zlib.dir/inflate.o<br>
        [  2%] -- [download 100% complete]<br>
        Building CXX object itk-mhd/MetaIO/CMakeFiles/Meta<wbr>IO.dir/metaArrow.o<br>
        -- [download 100% complete]<br>
        [  2%] [  2%] Building CXX object<br>
        itk-mhd/MetaIO/CMakeFiles/Meta<wbr>IO.dir/metaBlob.o<br>
        Building C object itk-mhd/itkzlib/CMakeFiles/itk<wbr>zlib.dir/inftrees.o<br>
        [  2%] Building C object<br>
        itk-mhd/itkzlib/CMakeFiles/itk<wbr>zlib.dir/trees.o<br>
        -- [download 0% complete]<br>
        [  2%] Building CXX object<br>
        itk-mhd/MetaIO/CMakeFiles/Meta<wbr>IO.dir/metaCommand.o<br>
        -- [download 0% complete]</blockquote>
</blockquote></div><br></div></div>