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<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D;mso-fareast-language:EN-US">Dear Awad,<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D;mso-fareast-language:EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D;mso-fareast-language:EN-US">I added some comments/answers to your questions. Please, do not forget to keep the main gate users list always in the
loop. In this way everybody would be able to read and help. Hope my contribution will help.<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D;mso-fareast-language:EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D;mso-fareast-language:EN-US">Best,<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D;mso-fareast-language:EN-US">Alessio<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D;mso-fareast-language:EN-US"><o:p> </o:p></span></p>
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<p class="MsoNormal"><b><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif">From:</span></b><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif"> Awad Almarhaby [mailto:mph-awad@hotmail.com]
<br>
<b>Sent:</b> Mittwoch, 14. September 2016 16:43<br>
<b>To:</b> Elia Alessio <alessio.elia@medaustron.at><br>
<b>Subject:</b> Re: Multiple Fields<o:p></o:p></span></p>
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<p class="MsoNormal"><span lang="EN-US"><o:p> </o:p></span></p>
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<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:#006FC9">Dear Elia,</span><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"><o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"><o:p> </o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:#006FC9">Many thanks for your helpful replies and I apologize for the extra questions. In fact, I am struggling at dose calculations.</span><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"><o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:#1F497D"><o:p> </o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D"><o:p> </o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:#006FC9">-Should I use boxes instead of cylindrical/spherical phantoms to overcome the voxelization issue?</span><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"><o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D">It is not mandatory. Basically it depends on what you need to do. If for you is good enough having a box instead of a cylinder or a sphere
than you can easily score dose values directly as well. On the other hand, if you really need to simulate a cylindrical/spherical object, I would recommend to score the energy deposited and from these values calculate the dose in the volume of interest.
<o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D"><o:p> </o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:#006FC9">- Should the dose be calculated using the dose output or the energy deposited file?</span><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"><o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D">Again, it depends on what you want to do.
<o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D"><o:p> </o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:#006FC9">-How can I estimate the dose theoretically before running simulations? Is it based on the number of particles? If yes, then how much protons or electrons required
to produce 1 Gy in medium?</span><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"><o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D">Good question. Yes, dose is related to number of particles that you delivered and yes, theoretically you can estimated the number of particles
that you need in order to get a wanted value in the target, but here I think it is not easy to provide a generic answer and I guess is important referring to a more specific (and easier) situation (like considering water and only protons for example). In this
case, you can analytically estimate the number of particles as long as you know the water mass stopping power value and the dose area product (both at reference depth) but I do not think you can actually simulate by a MC approach the number of particles that
you will get (I mean, you could.. if you wait enough..). Indeed, a typical approach is to simulate a certain number of particles (lower compare the number that you actually need but high enough to fulfill your uncertainties requirements) and then re-scale
the obtained dose.<o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:#1F497D"><o:p> </o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D"><o:p> </o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D"><o:p> </o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:#006FC9">I am really sorry about inconvenience.</span><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"><o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"><o:p> </o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:#006FC9">Best regards,</span><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"><o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:#006FC9">Awad</span><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"><o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"><o:p> </o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"><o:p> </o:p></span></p>
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<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">Sent from
</span><a href="http://aka.ms/weboutlook" id="LPNoLP"><span lang="EN-US" style="font-family:"Calibri",sans-serif">Outlook</span></a><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"><o:p></o:p></span></p>
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<p class="MsoNormal" style="margin-bottom:12.0pt;background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"><o:p> </o:p></span></p>
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<p class="MsoNormal" style="background:white"><b><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:black">From:</span></b><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:black"> Elia Alessio
<</span><a href="mailto:alessio.elia@medaustron.at"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif">alessio.elia@medaustron.at</span></a><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:black">><br>
<b>Sent:</b> Wednesday, September 14, 2016 3:09 PM<br>
<b>To:</b> Awad Almarhaby<br>
<b>Cc:</b> </span><a href="mailto:gate-users@lists.opengatecollaboration.org"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif">gate-users@lists.opengatecollaboration.org</span></a><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:black"><br>
<b>Subject:</b> RE: Multiple Fields</span><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">
<o:p></o:p></span></p>
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<p class="MsoNormal" style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> <o:p></o:p></span></p>
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<p style="background:white"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D">Dear Awad,</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D">Yes, the number of particles are divided into the number of sources you are simulating, therefore you will end up with the same dose values.</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D">I just have a further small comment that can maybe be useful for you. I have noticed that you are directly scoring dose values into cylindrical/spherical
objects. In this case, I would recommend you to enable the energy deposited flag:</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D">/gate/actor/dose/enableEdep true</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D">and therefore post process the dose in the volume of interest from these values. At the current status, the dose actor is taking into account
your voxelized geometry for dose computation and not the real geometry of your object. This means that you could have some deviations in dose from the expected dose into cylindrical/spherical objects.</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D">Hope this can help.</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D">Best</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D">Alessio</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
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<p style="background:white"><b><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:black">From:</span></b><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:black"> Gate-users [</span><a href="mailto:gate-users-bounces@lists.opengatecollaboration.org"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif">mailto:gate-users-bounces@lists.opengatecollaboration.org</span></a><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:black">]
<b>On Behalf Of </b>Awad Almarhaby<br>
<b>Sent:</b> Mittwoch, 14. September 2016 11:41<br>
<b>To:</b> </span><a href="mailto:gate-users@lists.opengatecollaboration.org"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif">gate-users@lists.opengatecollaboration.org</span></a><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:black"><br>
<b>Subject:</b> [Gate-users] Multiple Fields</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
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<p style="background:white"><span lang="EN-US" style="color:black"> <o:p></o:p></span></p>
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<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">Dears Gate users,<o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> <o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">I am running an example as exercise for basic dose calculations. It consists of a cylindrical phantom (patient) contains a target treated by
<b>ONE</b> proton PBS. Then I summed all the resulted dose in phantom and target separately (phantom 18.81 cGy, target 48.3 cGy). I run the example again with
<b>TWO</b> beams and I got the same numbers for both dose actors. The number of primaries was the same in both simulations. <o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">Is the primaries are split on the two beams by default? Am I on the correct way of dose calc.?<o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">Here a copy of the main macro.<o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> <o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">Thanks in advance,<o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">Awad<o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> <o:p></o:p></span></p>
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<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
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<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">#=====================================================</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
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<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"># VERBOSE and VISUALISATION</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
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<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">#=====================================================</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
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<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
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<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/control/execute mac/verbose.mac</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
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<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">#/control/execute mac/visu.mac</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
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<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
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<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">#=====================================================</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
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<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"># GEOMETRY</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
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<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">#=====================================================</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
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<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
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<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/geometry/setMaterialDatabase data/GateMaterials.db</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
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<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/geometry/setMaterialDatabase data/patient-HUmaterials.db</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
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<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
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<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"># WORLD</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
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<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/world/setMaterial Air</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
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<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/world/geometry/setXLength 5.0 m</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
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<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/world/geometry/setYLength 5.0 m</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/world/geometry/setZLength 5.0 m</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">#/gate/world/placement/setTranslation 0 0 0 mm</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"># WATERCYLINDER</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/world/daughters/name water_cylinder</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/world/daughters/insert cylinder</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/water_cylinder/setMaterial Water</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/water_cylinder/geometry/setRmin 0 cm</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/water_cylinder/geometry/setRmax 15 cm</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/water_cylinder/geometry/setHeight 40 cm</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/water_cylinder/placement/setRotationAxis 1 0 0</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/water_cylinder/placement/setRotationAngle 90 deg</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/water_cylinder/placement/setTranslation 0.0 0.0 0.0 cm</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/water_cylinder/vis/setColor blue</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/water_cylinder/vis/forceWireframe </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">#Tumor</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/water_cylinder/daughters/name target</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/water_cylinder/daughters/insert sphere</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/target/setMaterial Water</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/target/geometry/setRmin 0 cm</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/target/geometry/setRmax 3 cm</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/target/placement/setTranslation 0.0 0.0 0.0 cm</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/target/vis/setColor red</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">#=====================================================</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"># PHYSICS</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">#=====================================================</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/physics/addPhysicsList emstandard_opt3</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/physics/Gamma/SetCutInRegion world 1 mm</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/physics/Electron/SetCutInRegion world 1 mm</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/physics/Positron/SetCutInRegion world 1 mm</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/physics/Gamma/SetCutInRegion water_cylinder 0.1 mm</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/physics/Electron/SetCutInRegion water_cylinder 0.1 mm</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/physics/Positron/SetCutInRegion water_cylinder 0.1 mm</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/physics/Gamma/SetCutInRegion target 0.1 mm</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/physics/Electron/SetCutInRegion target 0.1 mm</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/physics/Positron/SetCutInRegion target 0.1 mm</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/physics/SetMaxStepSizeInRegion world 1 mm</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/physics/ActivateStepLimiter proton</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/physics/ActivateStepLimiter deuteron</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/physics/ActivateStepLimiter triton</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/physics/ActivateStepLimiter alpha</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/physics/ActivateStepLimiter GenericIon</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/physics/ActivateStepLimiter proton</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/physics/ActivateStepLimiter e-</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">#=====================================================</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"># Statistics actor</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">#=====================================================</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/actor/addActor SimulationStatisticActor stat</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/actor/stat/saveEveryNSeconds 60</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/actor/stat/save output/statistics.txt</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">#=====================================================</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"># Dose Actor</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">#=====================================================</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/actor/addActor DoseActor dose</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/actor/dose/save output/phantom2Fields.txt</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/actor/dose/attachTo </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> water_cylinder</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/actor/dose/stepHitType random</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/actor/dose/setPosition 0 0 0 cm</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/actor/dose/setResolution 100 100 300</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/actor/dose/setSize 8 8 30 cm</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/actor/dose/saveEveryNSeconds 60</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> /gate/actor/dose/enableEdep false</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/actor/dose/enableUncertaintyEdep false</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/actor/dose/enableDose true</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/actor/dose/enableUncertaintyDose true</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/actor/dose/enableNumberOfHits false</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/actor/addActor DoseActor dose1</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/actor/dose1/save output/target2Fields.txt</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/actor/dose1/attachTo </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> target</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/actor/dose1/stepHitType random</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/actor/dose1/setPosition 0 0 0 cm</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/actor/dose1/setResolution 100 100 100</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/actor/dose1/setSize 6 6 6 cm</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/actor/dose1/saveEveryNSeconds 60 </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/actor/dose1/enableEdep false</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/actor/dose1/enableUncertaintyEdep false</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/actor/dose1/enableDose true</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/actor/dose1/enableUncertaintyDose true</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/actor/dose1/enableNumberOfHits false</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">#=====================================</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"># SOURCE</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">#=====================================</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/source/addSource PBS PencilBeam</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/source/PBS/setPosition 0 0 -50 cm</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/source/PBS/setEnergy 150 MeV</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/source/PBS/setSigmaEnergy 0.1 MeV</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/source/PBS/setSigmaX 3 mm</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/source/PBS/setSigmaY 3 mm</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/source/PBS/setSigmaTheta 1 mrad</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/source/PBS/setSigmaPhi 1 mrad</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/source/PBS/setEllipseXThetaEmittance 5 mm*mrad</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/source/PBS/setEllipseXThetaRotationNorm positive</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/source/PBS/setEllipseYPhiEmittance 5 mm*mrad</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/source/PBS/setEllipseYPhiRotationNorm positive</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/source/PBS/setParticleType proton</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/source/PBS/setRotationAxis 1 0 0</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/source/PBS/setRotationAngle 0 deg</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/source/addSource PBS2 PencilBeam</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/source/PBS2/setPosition 0 0 50 cm</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/source/PBS2/setEnergy 150 MeV</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/source/PBS2/setSigmaEnergy 0.1 MeV</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/source/PBS2/setSigmaX 3 mm</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/source/PBS2/setSigmaY 3 mm</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/source/PBS2/setSigmaTheta 1 mrad</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/source/PBS2/setSigmaPhi 1 mrad</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/source/PBS2/setEllipseXThetaEmittance 5 mm*mrad</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/source/PBS2/setEllipseXThetaRotationNorm positive</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/source/PBS2/setEllipseYPhiEmittance 5 mm*mrad</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/source/PBS2/setEllipseYPhiRotationNorm positive</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/source/PBS2/setParticleType proton</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/source/PBS2/setRotationAxis 1 0 0</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/source/PBS2/setRotationAngle 180 deg</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">#=====================================================</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"># INITIALISATION</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">#=====================================================</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/run/initialize</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">#=====================================================</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"># START BEAMS</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">#=====================================================</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/random/setEngineName MersenneTwister</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/random/setEngineSeed auto</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"># When only using the EmCalculator actor for various configurations</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"># (without caring of the dose deposition)</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">#/gate/application/setTotalNumberOfPrimaries 1</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"># Otherwise</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/application/setTotalNumberOfPrimaries 1000000</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">/gate/application/start</span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
</div>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> </span><span lang="EN-US" style="color:black"><o:p></o:p></span></p>
<p style="background:white"><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> <o:p></o:p></span></p>
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