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<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy">Sorry, I was not very clear in my last message; actually, the start position of my beam was (0,0,0) with this code, and I
would like to put the source at (0,60,0), and rotate the beam in the -y direction.<o:p></o:p></span></font></p>
<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy">I get the same result with a ‘0 60 0 cm’ translation, the beam starts at (0,0,0), and the direction is along z-axis.<o:p></o:p></span></font></p>
<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy"><o:p> </o:p></span></font></p>
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<p class="MsoNormal"><b><font size="2" face="Tahoma"><span style="font-size:10.0pt;
font-family:Tahoma;font-weight:bold">De :</span></font></b><font size="2" face="Tahoma"><span style="font-size:10.0pt;font-family:Tahoma"> Grevillot Loic [mailto:loic.grevillot@medaustron.at]
<br>
<b><span style="font-weight:bold">Envoyé :</span></b> lundi 27 avril 2015 15:16<br>
<b><span style="font-weight:bold">À :</span></b> REUZE SYLVAIN; Gate Users<br>
<b><span style="font-weight:bold">Objet :</span></b> RE: Phase space position (input)</span></font><o:p></o:p></p>
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12.0pt"><o:p> </o:p></span></font></p>
<p class="MsoNormal"><font size="2" color="#1f497d" face="Calibri"><span lang="EN-US" style="font-size:11.0pt;font-family:Calibri;color:#1F497D">It looks like your translation is at z=0:<u5:p></u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy">/gate/beam1/placement/setTranslation 0 60
<st1:metricconverter ProductID="0 cm" w:st="on">0 cm<u5:p></u5:p></st1:metricconverter></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="#1f497d" face="Calibri"><span lang="EN-US" style="font-size:11.0pt;font-family:Calibri;color:#1F497D"><u5:p> </u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="#1f497d" face="Calibri"><span lang="EN-US" style="font-size:11.0pt;font-family:Calibri;color:#1F497D">Please try something like<u5:p></u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy">/gate/beam1/placement/setTranslation 0 60
<st1:metricconverter ProductID="10 cm" w:st="on">10 cm<u5:p></u5:p></st1:metricconverter></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="#1f497d" face="Calibri"><span lang="EN-GB" style="font-size:11.0pt;font-family:Calibri;color:#1F497D">And check if particles start at z=10 cm.<u5:p></u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="#1f497d" face="Calibri"><span lang="EN-US" style="font-size:11.0pt;font-family:Calibri;color:#1F497D"><u5:p> </u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="#1f497d" face="Verdana"><span lang="DE" style="font-size:10.0pt;font-family:Verdana;color:#1F497D">Sincerely,<u5:p></u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="#1f497d" face="Verdana"><span lang="DE" style="font-size:10.0pt;font-family:Verdana;color:#1F497D">Loïc</span></font><span lang="EN-US"><u5:p></u5:p><o:p></o:p></span></p>
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<p class="MsoNormal"><font size="2" color="#1f497d" face="Calibri"><span lang="EN-GB" style="font-size:11.0pt;font-family:Calibri;color:#1F497D"><u5:p> </u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="#1f497d" face="Calibri"><span lang="EN-US" style="font-size:11.0pt;font-family:Calibri;color:#1F497D"><u5:p> </u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
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<p class="MsoNormal"><b><font size="2" face="Tahoma"><span lang="EN-US" style="font-size:10.0pt;font-family:Tahoma;font-weight:bold">From:</span></font></b><font size="2" face="Tahoma"><span lang="EN-US" style="font-size:10.0pt;font-family:Tahoma"> REUZE SYLVAIN
[mailto:SYLVAIN.REUZE@gustaveroussy.fr] <br>
<b><span style="font-weight:bold">Sent:</span></b> Monday, April 27, 2015 2:50 PM<br>
<b><span style="font-weight:bold">To:</span></b> Grevillot Loic; Gate Users<br>
<b><span style="font-weight:bold">Subject:</span></b> RE: Phase space position (input)<u5:p></u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
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<p class="MsoNormal"><u5:p><font size="3" face="Times New Roman"><span lang="EN-US" style="font-size:12.0pt"> <o:p></o:p></span></font></u5:p></p>
<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy">Hello,<u5:p></u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy"><u5:p> </u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy">Thanks for your answer ; I tried to attach the phase space to a volume, but my beam still starts at z = 0. The visualization
is correct with /gate/source/clinaciX1/visualize (I can see a point at the good position). But when I want to see the beam, all particles come from z=0, to positive z values. That’s the same in my dose actor.<u5:p></u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy"><u5:p> </u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy">Here is the beam part of my code:<u5:p></u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy"><u5:p> </u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy">#beam 1<u5:p></u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy">/gate/world/daughters/name beam1<u5:p></u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy">/gate/world/daughters/insert box<u5:p></u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy">/gate/beam1/vis/forceSolid<u5:p></u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy">/gate/beam1/vis/setColor yellow<u5:p></u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy">/gate/beam1/geometry/setXLength
<st1:metricconverter ProductID="1 cm" w:st="on">1 cm<u5:p></u5:p></st1:metricconverter></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy">/gate/beam1/geometry/setYLength
<st1:metricconverter ProductID="1 cm" w:st="on">1 cm<u5:p></u5:p></st1:metricconverter></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy">/gate/beam1/geometry/setZLength
<st1:metricconverter ProductID="1 cm" w:st="on">1 cm<u5:p></u5:p></st1:metricconverter></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy">/gate/beam1/placement/setTranslation 0 60
<st1:metricconverter ProductID="0 cm" w:st="on">0 cm<u5:p></u5:p></st1:metricconverter></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy">/gate/beam1/placement/setRotationAxis 1 0 0
<u5:p></u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy">/gate/beam1/placement/setRotationAngle 90 deg<u5:p></u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy"><u5:p> </u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy">/gate/source/addSource clinaciX1 phaseSpace<u5:p></u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy">/gate/source/clinaciX1/setPhaseSpaceInWorldFrame<u5:p></u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy">/gate/source/clinaciX1/addPhaseSpaceFile ../transfo_IAEA_ROOT/PSF_iX_6MV_10x10_final.root<u5:p></u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy">/gate/source/clinaciX1/attachTo beam1<u5:p></u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy">/gate/source/clinaciX1/visualize 2000 yellow 10<u5:p></u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy"><u5:p> </u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy">Could you help me ?<u5:p></u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy"><u5:p> </u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy">Best regards,<u5:p></u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy"><u5:p> </u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
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<p class="MsoNormal" style="text-indent:35.4pt"><b><font size="2" color="navy" face="Arial"><span style="font-size:10.0pt;font-family:Arial;color:navy;
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</span></font></b><span lang="EN-US"><u5:p></u5:p><o:p></o:p></span></p>
<p class="MsoNormal" style="text-indent:35.4pt"><font size="2" color="navy" face="Arial"><span style="font-size:10.0pt;font-family:Arial;color:navy">Stagiaire physicien</span></font><span lang="EN-US"><u5:p></u5:p><o:p></o:p></span></p>
<p class="MsoNormal" style="margin-left:35.4pt"><font size="2" color="navy" face="Arial"><span style="font-size:10.0pt;font-family:Arial;color:navy">Département de Radiothérapie</span></font><span lang="EN-US"><u5:p></u5:p><o:p></o:p></span></p>
<p class="MsoNormal" style="margin-left:35.4pt"><font size="2" color="navy" face="Arial"><span style="font-size:10.0pt;font-family:Arial;color:navy">Service de physique médicale</span></font><span lang="EN-US"><u5:p></u5:p><o:p></o:p></span></p>
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<p class="MsoNormal"><b><font size="2" face="Tahoma"><span style="font-size:10.0pt;
font-family:Tahoma;font-weight:bold">De :</span></font></b><font size="2" face="Tahoma"><span style="font-size:10.0pt;font-family:Tahoma"> Grevillot Loic [<a href="mailto:loic.grevillot@medaustron.at">mailto:loic.grevillot@medaustron.at</a>]
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<b><span style="font-weight:bold">Envoyé :</span></b> lundi 27 avril 2015 08:19<br>
<b><span style="font-weight:bold">À :</span></b> REUZE SYLVAIN; Gate Users<br>
<b><span style="font-weight:bold">Objet :</span></b> RE: Phase space position (input)</span></font><span lang="EN-US"><u5:p></u5:p><o:p></o:p></span></p>
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<p class="MsoNormal"><font size="3" face="Times New Roman"><span style="font-size:
12.0pt"><u5:p> </u5:p></span></font><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="#1f497d" face="Calibri"><span lang="EN-US" style="font-size:11.0pt;font-family:Calibri;color:#1F497D">Hello,</span></font><u5:p></u5:p><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="#1f497d" face="Calibri"><span lang="EN-US" style="font-size:11.0pt;font-family:Calibri;color:#1F497D">Did you try to attach the PhS to a volume and rotate/translate the volume?</span></font><u5:p></u5:p><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="#1f497d" face="Verdana"><span lang="DE" style="font-size:10.0pt;font-family:Verdana;color:#1F497D">Sincerely,</span></font><u5:p></u5:p><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="#1f497d" face="Verdana"><span lang="DE" style="font-size:10.0pt;font-family:Verdana;color:#1F497D">Loïc</span></font><u5:p></u5:p><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" color="#1f497d" face="Calibri"><span lang="EN-US" style="font-size:11.0pt;font-family:Calibri;color:#1F497D"> </span></font><u5:p></u5:p><span lang="EN-US"><o:p></o:p></span></p>
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<p class="MsoNormal"><font size="2" color="#1f497d" face="Calibri"><span lang="EN-US" style="font-size:11.0pt;font-family:Calibri;color:#1F497D"> </span></font><u5:p></u5:p><span lang="EN-US"><o:p></o:p></span></p>
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<p class="MsoNormal"><b><font size="2" face="Tahoma"><span lang="EN-US" style="font-size:10.0pt;font-family:Tahoma;font-weight:bold">From:</span></font></b><font size="2" face="Tahoma"><span lang="EN-US" style="font-size:10.0pt;font-family:Tahoma">
<a href="mailto:gate-users-bounces@lists.opengatecollaboration.org">gate-users-bounces@lists.opengatecollaboration.org</a> [<a href="mailto:gate-users-bounces@lists.opengatecollaboration.org">mailto:gate-users-bounces@lists.opengatecollaboration.org</a>]
<b><span style="font-weight:bold">On Behalf Of </span></b>REUZE SYLVAIN<br>
<b><span style="font-weight:bold">Sent:</span></b> Friday, April 24, 2015 4:24 PM<br>
<b><span style="font-weight:bold">To:</span></b> Gate Users<br>
<b><span style="font-weight:bold">Subject:</span></b> [Gate-users] Phase space position (input)</span></font><u5:p></u5:p><span lang="EN-US"><o:p></o:p></span></p>
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<p class="MsoNormal"><font size="3" face="Times New Roman"><span lang="EN-US" style="font-size:12.0pt"> <o:p></o:p></span></font><u5:p></u5:p></p>
<p class="MsoNormal"><font size="2" face="Arial"><span lang="EN-GB" style="font-size:
10.0pt;font-family:Arial">Dear Gate users,</span></font><u5:p></u5:p><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" face="Arial"><span lang="EN-GB" style="font-size:
10.0pt;font-family:Arial">Is there a solution to modify the input phase space position (in translation or rotation), for radiotherapy application?</span></font><u5:p></u5:p><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" face="Arial"><span lang="EN-GB" style="font-size:
10.0pt;font-family:Arial">It is different from other sources or beams, and I can’t find anything about that in the wiki.</span></font><u5:p></u5:p><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" face="Arial"><span lang="EN-GB" style="font-size:
10.0pt;font-family:Arial">Thanks in advance for your answer</span></font><u5:p></u5:p><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" face="Arial"><span lang="EN-GB" style="font-size:
10.0pt;font-family:Arial">Best regards,
</span></font><u5:p></u5:p><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal"><font size="2" face="Arial"><span lang="EN-GB" style="font-size:
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<p class="MsoNormal" style="text-indent:35.4pt"><b><font size="2" face="Arial"><span style="font-size:10.0pt;font-family:Arial;font-weight:bold">Sylvain Reuzé
</span></font></b><u5:p></u5:p><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal" style="text-indent:35.4pt"><font size="2" face="Arial"><span style="font-size:10.0pt;font-family:Arial">Stagiaire physicien</span></font><u5:p></u5:p><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoNormal" style="margin-left:35.4pt"><font size="2" face="Arial"><span style="font-size:10.0pt;font-family:Arial">Département de Radiothérapie</span></font><u5:p></u5:p><span lang="EN-US"><o:p></o:p></span></p>
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