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<div class="moz-cite-prefix"><font size="-1">Could it comes from
vGATE itself ?<br>
I never used it so I don't know how physics lists work on it...<br>
Nicolas<br>
</font>
<pre class="moz-signature" cols="72">***********************************************************************
Nicolas ARBOR
Maître de Conférences
Université de Strasbourg - UFR Physique et Ingénierie
Groupe de recherche RaMsEs - Institut Pluridisciplinaire Hubert Curien
23, rue du Loess BP28 67037 Strasbourg Cedex 2
mail : <a class="moz-txt-link-abbreviated" href="mailto:nicolas.arbor@iphc.cnrs.fr">nicolas.arbor@iphc.cnrs.fr</a> / tel : 03.88.10.64.27
***********************************************************************</pre>
Le 16/01/2015 15:24, Marc Chamberland a écrit :<br>
</div>
<blockquote
cite="mid:305E0938-70D0-457D-BCB0-D4F88AAB9F46@cmail.carleton.ca"
type="cite">
<meta http-equiv="Content-Type" content="text/html;
charset=windows-1252">
Hi Débora,
<div class=""><br class="">
</div>
<div class="">I tried your macro on Gate v7.0 with Geant4.9.6 and
it worked (see Root output attached). I don’t know what could be
going wrong on your system.</div>
<div class=""> </div>
<div class="">
<div apple-content-edited="true" class=""><span
class="Apple-style-span" style="border-collapse: separate;
border-spacing: 0px;">
<div style="word-wrap: break-word; -webkit-nbsp-mode: space;
-webkit-line-break: after-white-space; " class="">
<div class="">Marc</div>
<div class=""><br class="">
</div>
<div class=""><br class="">
</div>
<div class=""><br class="">
</div>
</div>
</span></div>
<div>
<blockquote type="cite" class="">
<div class="">On Jan 16, 2015, at 08:32, Débora Salvado <<a
moz-do-not-send="true" href="mailto:debbiesal@gmail.com"
class="">debbiesal@gmail.com</a>> wrote:</div>
<br class="Apple-interchange-newline">
<div class="">
<div dir="ltr" class="">
<div class="">
<div class="">Dear GATE users,<br class="">
<br class="">
I've tried Uwe's suggestion and I keep getting lots
of messages saying:<br class="">
=====================================<br class="">
G4EventManager::ProcessOneEvent()<br class="">
<div class=""> =====================================<br
class="">
G4PrimaryTransformer::PrimaryVertex
(0(mm),0(mm),0(mm),1.51525e+08(nsec))<br class="">
1 primaries are passed from G4EventTransformer.<br
class="">
!!!!!!! Now start processing an event !!!!!!!<br
class="">
Track (trackID 1, parentID 0) is processed with
stopping code 2<br class="">
Track (trackID 3, parentID 1) is processed with
stopping code 2<br class="">
Track (trackID 2, parentID 1) is processed with
stopping code 2<br class="">
NULL returned from G4StackManager.<br class="">
Terminate current event processing.</div>
<br class="">
</div>
I also tried Nicolas' suggestion about the physics
process but it says command not found (is it not
included on vGATE? that's strange).<br class="">
<br class="">
</div>
<div class="">Any more suggestions?<br class="">
<br class="">
</div>
<div class="">Regards,<br class="" clear="all">
<div class="">
<div class="gmail_extra">
<div class="">
<div class="">Débora Salvado</div>
</div>
<br class="">
<br class="">
<div class="gmail_quote">2015-01-16 13:08
GMT+00:00 Débora Salvado <span dir="ltr"
class="">
<<a moz-do-not-send="true"
href="mailto:debbiesal@gmail.com"
target="_blank" class="">debbiesal@gmail.com</a>></span>:<br
class="">
<blockquote class="gmail_quote"
style="margin:0px 0px 0px
0.8ex;border-left:1px solid
rgb(204,204,204);padding-left:1ex">
<div class="gmail_extra"><span class=""></span>
<div class="">
<div class=""><br class="">
<div class="gmail_quote">2015-01-16
12:37 GMT+00:00 Nicolas ARBOR <span
dir="ltr" class="">
<<a moz-do-not-send="true"
href="mailto:nicolas.arbor@iphc.cnrs.fr"
target="_blank" class="">nicolas.arbor@iphc.cnrs.fr</a>></span>:<br
class="">
<blockquote class="gmail_quote"
style="margin:0px 0px 0px
0.8ex;border-left:1px solid
rgb(204,204,204);padding-left:1ex">
<div bgcolor="#FFFFFF"
text="#000000" class="">
<div class="">This is
strange...may be build physics
list don't worked with vGate
(?).<br class="">
Have you try modifications from
Uwe ? Does it work ?<span
class=""><br class="">
Nicolas<br class="">
<pre cols="72" class="">***********************************************************************
Nicolas ARBOR
Maître de Conférences
Université de Strasbourg - UFR Physique et Ingénierie
Groupe de recherche RaMsEs - Institut Pluridisciplinaire Hubert Curien
23, rue du Loess BP28 67037 Strasbourg Cedex 2
mail : <a moz-do-not-send="true" href="mailto:nicolas.arbor@iphc.cnrs.fr" target="_blank" class="">nicolas.arbor@iphc.cnrs.fr</a> / tel : 03.88.10.64.27
***********************************************************************</pre>
</span>Le 16/01/15 13:27, Débora
Salvado a écrit :<br class="">
</div>
<div class="">
<div class="">
<blockquote type="cite"
class="">
<div dir="ltr" class="">It
gives me an error:<br
class="">
***** COMMAND NOT FOUND
</gate/physics/addPhysicsList
emstandard_opt3> *****<br
class="">
</div>
<div class="gmail_extra"><br
class="" clear="all">
<div class="">
<div class="">Débora
Salvado</div>
</div>
<br class="">
<div class="gmail_quote">2015-01-16
11:50 GMT+00:00 narbor <span
dir="ltr" class="">
<<a
moz-do-not-send="true"
href="mailto:nicolas.arbor@iphc.cnrs.fr" target="_blank" class="">nicolas.arbor@iphc.cnrs.fr</a>></span>:<br
class="">
<blockquote
class="gmail_quote"
style="margin:0px 0px
0px
0.8ex;border-left:1px
solid
rgb(204,204,204);padding-left:1ex">
<div bgcolor="#FFFFFF"
text="#000000"
class="">
<div class=""><font
class=""
size="-1">Just
to check...does
it changes
something if you
use for the
physics (instead
of what you
have) ?<br
class="">
/gate/physics/addPhysicsList
emstandard_opt3<br
class="">
/gate/physics/addProcess
RadioactiveDecay<br
class="">
Nicolas<br
class="">
</font>
<pre cols="72" class="">***********************************************************************
Nicolas ARBOR
Maître de Conférences
Université de Strasbourg - UFR Physique et Ingénierie
Groupe de recherche RaMsEs - Institut Pluridisciplinaire Hubert Curien
23, rue du Loess BP28 67037 Strasbourg Cedex 2
mail : <a moz-do-not-send="true" href="mailto:nicolas.arbor@iphc.cnrs.fr" target="_blank" class="">nicolas.arbor@iphc.cnrs.fr</a> / tel : 03.88.10.64.27
***********************************************************************</pre>
Le 16/01/2015
12:40, Débora
Salvado a écrit :<br
class="">
</div>
<div class="">
<div class="">
<blockquote
type="cite"
class="">
<div dir="ltr"
class="">Hi,<br
class="">
I've attached
my main macro,
let me know if
you have any
problems to
see it.<br
class="">
<br class=""
clear="all">
<div class="">
<div class="">
<div class="">Débora
Salvado<br
class="">
<br class="">
<br class="">
------------------------------<br class="">
<br class="">
Message: 2<br
class="">
Date: Fri, 16
Jan 2015
12:18:30 +0100<br
class="">
From: narbor
<<a
moz-do-not-send="true"
href="mailto:nicolas.arbor@iphc.cnrs.fr" target="_blank" class="">nicolas.arbor@iphc.cnrs.fr</a>><br
class="">
To: D?bora
Salvado <<a
moz-do-not-send="true" href="mailto:debbiesal@gmail.com" target="_blank"
class="">debbiesal@gmail.com</a>><br
class="">
Cc: Gate Users
<<a
moz-do-not-send="true"
href="mailto:gate-users@lists.opengatecollaboration.org" target="_blank"
class="">gate-users@lists.opengatecollaboration.org</a>><br
class="">
Subject: Re:
[Gate-users]
Ion source:
empty output<br
class="">
Message-ID:
<<a
moz-do-not-send="true"
href="mailto:54B8F386.1060407@iphc.cnrs.fr" target="_blank" class="">54B8F386.1060407@iphc.cnrs.fr</a>
<div class="">><br
class="">
Content-Type:
text/plain;
charset="windows-1252";
Format="flowed"<br class="">
<br class="">
Hi D?bora,<br
class="">
Could you send
us your
main.mac file
just to have a
look ?<br
class="">
Thanks.<br
class="">
Nicolas Arbor<br
class="">
<br class="">
***********************************************************************<br
class="">
Nicolas ARBOR<br
class="">
Ma?tre de
Conf?rences<br
class="">
Universit? de
Strasbourg -
UFR Physique
et Ing?nierie<br
class="">
Groupe de
recherche
RaMsEs -
Institut
Pluridisciplinaire
Hubert Curien<br
class="">
***********************************************************************<br
class="">
<br class="">
Le 16/01/2015
12:09, D?bora
Salvado a
?crit :<br
class="">
> I
increased the
verbosity of
my simulation
to:<br
class="">
><br
class="">
>
/event/verbose
1<br class="">
><br
class="">
> and now
when I run my
simulation, it
keeps giving
me this
message:<br
class="">
><br
class="">
>
=====================================<br
class="">
>
G4EventManager::ProcessOneEvent()<br
class="">
>
=====================================<br
class="">
>
G4PrimaryTransformer::PrimaryVertex
(0(mm),0(mm),0(mm),1.51525e+08(nsec))<br class="">
> 1
primaries are
passed from
G4EventTransformer.<br
class="">
> !!!!!!!
Now start
processing an
event !!!!!!!<br
class="">
> Track
(trackID 1,
parentID 0) is
processed with
stopping code
2<br class="">
> Track
(trackID 3,
parentID 1) is
processed with
stopping code
2<br class="">
> Track
(trackID 2,
parentID 1) is
processed with
stopping code
2<br class="">
> NULL
returned from
G4StackManager.<br class="">
> Terminate
current event
processing.<br
class="">
><br
class="">
> I've read
that some
users solved
this problem
by adding the<br
class="">
>
RadioactiveDecay
process to
their physics
list. But I
have it in my<br
class="">
> macro...
so can someone
help me?<br
class="">
><br
class="">
> Thanks,<br
class="">
> D?bora
Salvado<br
class="">
><br
class="">
><br
class="">
><br
class="">
>
2015-01-15
19:22
GMT+00:00 Marc
Chamberland<br
class="">
> <<a
moz-do-not-send="true"
href="mailto:MarcChamberland@cmail.carleton.ca" target="_blank" class="">MarcChamberland@cmail.carleton.ca</a><br
class="">
>
<mailto:<a
moz-do-not-send="true" href="mailto:MarcChamberland@cmail.carleton.ca"
target="_blank"
class="">MarcChamberland@cmail.carleton.ca</a>>>:<br
class="">
><br
class="">
> Hmm?
I don?t have
experience
with the
sinogram
output, so I?d
try<br
class="">
>
looking at
the Root
singles
output. Is it
also empty?<br
class="">
><br
class="">
>
Perhaps also
increasing the
verbosity
might help you
diagnose<br
class="">
>
what?s going
on. I don?t
know which
verbosity to
increase,
though!<br
class="">
>
Perhaps:<br
class="">
><br
class="">
>
/event/verbose
1 (or 2 or 3)<br
class="">
> See
if this
produces any
messages that
might point
you in the<br
class="">
> right
direction.<br
class="">
><br
class="">
> Marc<br
class="">
><br
class="">
><br
class="">
><br
class="">
>
__________________________<br
class="">
><br
class="">
> Marc
Chamberland,
MSc<br
class="">
> PhD
candidate<br
class="">
>
Department of
Physics<br
class="">
>
Carleton
University<br
class="">
>
Ottawa (ON)<br
class="">
><br
class="">
>>
On Jan 15,
2015, at
14:04, D?bora
Salvado <<a
moz-do-not-send="true" href="mailto:debbiesal@gmail.com" target="_blank"
class="">debbiesal@gmail.com</a><br
class="">
>>
<mailto:<a
moz-do-not-send="true" href="mailto:debbiesal@gmail.com" target="_blank"
class="">debbiesal@gmail.com</a>>>
wrote:<br
class="">
>><br
class="">
>>
Thanks Marc,<br
class="">
>><br
class="">
>> I
add this line
to the physics
list:<br
class="">
>>
/gate/physics/addProcess
RadioactiveDecay<br class="">
>><br
class="">
>>
and tried to
run: again no
errors but an
empty .sin
file at the
end.<br
class="">
>><br
class="">
>>
Any more
suggestions?<br
class="">
>><br
class="">
>>
D?bora
Salvado<br
class="">
>><br
class="">
>>
2015-01-15
18:36
GMT+00:00 Marc
Chamberland<br
class="">
>>
<<a
moz-do-not-send="true"
href="mailto:MarcChamberland@cmail.carleton.ca" target="_blank" class="">MarcChamberland@cmail.carleton.ca</a><br
class="">
>>
<mailto:<a
moz-do-not-send="true" href="mailto:MarcChamberland@cmail.carleton.ca"
target="_blank"
class="">MarcChamberland@cmail.carleton.ca</a>>>:<br
class="">
>><br
class="">
>>
Hi D?bora,<br
class="">
>><br
class="">
>>
The first
thing I would
check is that
your physics
list has<br
class="">
>>
the
radioactive
decay process
enabled.<br
class="">
>><br
class="">
>>
Marc<br
class="">
>><br
class="">
>><br
class="">
>><br
class="">
>>
__________________________<br
class="">
>><br
class="">
>>
Marc
Chamberland,
MSc<br
class="">
>>
PhD
candidate<br
class="">
>>
Department
of Physics<br
class="">
>>
Carleton
University<br
class="">
>>
Ottawa (ON)<br
class="">
>><br
class="">
>>>
On Jan
15, 2015, at
13:30, D?bora
Salvado<br
class="">
>>>
<<a
moz-do-not-send="true" href="mailto:debbiesal@gmail.com" target="_blank"
class="">debbiesal@gmail.com</a>
<mailto:<a
moz-do-not-send="true" href="mailto:debbiesal@gmail.com" target="_blank"
class="">debbiesal@gmail.com</a>>>
wrote:<br
class="">
>>><br
class="">
>>>
Dear
Gate users,<br
class="">
>>><br
class="">
>>>
I have
my main .mac
file
parameterized
for different
sources.<br
class="">
>>><br
class="">
>>>
It
works for the
following
definition of
source:<br
class="">
>>><br
class="">
>>>
/gate/source/addSource
source1<br
class="">
>>>
/gate/source/source1/gps/type
Point<br
class="">
>>>
/gate/source/source1/gps/centre
0. 0. 0. mm<br
class="">
>>>
/gate/source/source1/gps/particle
gamma<br
class="">
>>>
/gate/source/source1/gps/energy
159. keV<br
class="">
>>>
/gate/source/source1/setActivity
3000000. Bq<br
class="">
>>>
/gate/source/source1/gps/angtype
iso<br
class="">
>>><br
class="">
>>>
However, when
I try to run
it for an ion
source, with
this<br
class="">
>>>
definition:<br
class="">
>>><br
class="">
>>>
/gate/source/addSource
source1<br
class="">
>>>
/gate/source/source1/setActivity
3000000. Bq<br
class="">
>>>
/gate/source/source1/gps/type
Point<br
class="">
>>>
/gate/source/source1/gps/centre
0. 0. 0. mm<br
class="">
>>>
/gate/source/source1/gps/particle
ion<br
class="">
>>>
/gate/source/source1/gps/ion
53 123 0 0<br
class="">
>>>
/gate/source/source1/setForcedUnstableFlag
true<br
class="">
>>>
/gate/source/source1/setForcedHalfLife
47520. s<br
class="">
>>>
/gate/source/source1/gps/energytype
Mono<br
class="">
>>>
/gate/source/source1/gps/monoenergy
0. keV<br
class="">
>>>
/gate/source/source1/gps/number
1<br class="">
>>>
/gate/source/source1/gps/angtype
iso<br
class="">
>>>
/gate/source/source1/gps/mintheta
0. deg<br
class="">
>>>
/gate/source/source1/gps/maxtheta
180. deg<br
class="">
>>>
/gate/source/source1/gps/minphi
0. deg<br
class="">
>>>
/gate/source/source1/gps/maxphi
360. deg<br
class="">
>>><br
class="">
>>>
It runs
but the output
projection
file .sin is
empty...<br
class="">
>>>
When I
run with the
first source
instead, I get
a .sin file<br
class="">
>>>
with
some data.<br
class="">
>>>
I don't
really have an
error, it's
just that my
simulation<br
class="">
>>>
doesn't
generate
anything. Can
someone help
me figure out<br
class="">
>>>
what's
happening?<br
class="">
>>><br
class="">
>>>
Regards,<br
class="">
>>>
D?bora
Salvado<br
class="">
>>>
_______________________________________________<br
class="">
>>>
Gate-users
mailing list<br
class="">
>>>
<a
moz-do-not-send="true"
href="mailto:Gate-users@lists.opengatecollaboration.org" target="_blank"
class="">Gate-users@lists.opengatecollaboration.org</a><br
class="">
>>>
<mailto:<a
moz-do-not-send="true"
href="mailto:Gate-users@lists.opengatecollaboration.org"
target="_blank" class="">Gate-users@lists.opengatecollaboration.org</a>><br
class="">
>>>
<a
moz-do-not-send="true"
href="http://lists.opengatecollaboration.org/mailman/listinfo/gate-users"
target="_blank" class="">http://lists.opengatecollaboration.org/mailman/listinfo/gate-users</a><br
class="">
>><br
class="">
>><br
class="">
><br
class="">
><br
class="">
><br
class="">
><br
class="">
>
_______________________________________________<br
class="">
>
Gate-users
mailing list<br
class="">
> <a
moz-do-not-send="true"
href="mailto:Gate-users@lists.opengatecollaboration.org" target="_blank"
class="">
Gate-users@lists.opengatecollaboration.org</a><br class="">
> <a
moz-do-not-send="true"
href="http://lists.opengatecollaboration.org/mailman/listinfo/gate-users"
target="_blank" class="">
http://lists.opengatecollaboration.org/mailman/listinfo/gate-users</a></div>
<br class="">
</div>
</div>
</div>
</div>
<br class="">
<fieldset
class=""></fieldset>
<br class="">
<pre class="">_______________________________________________
Gate-users mailing list
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</blockquote>
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<br class="">
</div>
</blockquote>
<br class="">
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</div>
</div>
</blockquote>
</div>
<br class="">
</div>
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</blockquote>
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</div>
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</div>
</div>
_______________________________________________<br
class="">
Gate-users mailing list<br class="">
<a moz-do-not-send="true"
href="mailto:Gate-users@lists.opengatecollaboration.org"
class="">Gate-users@lists.opengatecollaboration.org</a><br
class="">
<a class="moz-txt-link-freetext" href="http://lists.opengatecollaboration.org/mailman/listinfo/gate-users">http://lists.opengatecollaboration.org/mailman/listinfo/gate-users</a></div>
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<pre wrap="">_______________________________________________
Gate-users mailing list
<a class="moz-txt-link-abbreviated" href="mailto:Gate-users@lists.opengatecollaboration.org">Gate-users@lists.opengatecollaboration.org</a>
<a class="moz-txt-link-freetext" href="http://lists.opengatecollaboration.org/mailman/listinfo/gate-users">http://lists.opengatecollaboration.org/mailman/listinfo/gate-users</a></pre>
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