<div dir="ltr">Hello, <div><br></div><div>if I remember correctly, interfile reader in gate can read little or bigendian. Another idea : unsigned integer should not be UNSIGNED INTEGER (in capitals) ? </div><div><br></div><div>but I admit I never used this image file format. Maybe give try to mhd/raw (metaimage) file format instead of interfile. </div><div><br></div><div>David</div></div><div class="gmail_extra"><br><div class="gmail_quote">On Fri, Dec 19, 2014 at 7:59 PM, Mike Tabriz <span dir="ltr"><<a href="mailto:mtabriz@yahoo.com" target="_blank">mtabriz@yahoo.com</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div><div style="color:#000;background-color:#fff;font-family:Courier New,courier,monaco,monospace,sans-serif;font-size:14px"><div dir="ltr">Dear Gate users,</div><div dir="ltr"> </div><div dir="ltr">I have used ImageJ to adjust the voxel dimensions (height, width, thickness)of the Zubal phantom to 4 mm, and have saved the image in the uint16 form. I save this image as interfile using xMedcon and get the following error message when I read the files into GATE:</div><div dir="ltr"> </div><div dir="ltr"> <span lang="EN"></span></div><div>Unrecognised type name 'unsigned integer'</div><div dir="ltr">
</div><div> Header read from 'data/voxel_man_16.h33'</div><div dir="ltr">
</div><div> Data file name 'data/voxel_man_16.i33'</div><div dir="ltr">
</div><div> Nb of planes: 0</div><div dir="ltr">
</div><div> Nb of pixels per plane: 128 128</div><div dir="ltr">
</div><div> Pixel size: 4.000e+00 4.000e+00</div><div dir="ltr">
</div><div> Slice thickness: 4.000e+00</div><div dir="ltr">
</div><div> Matrix size: 5.120e+02 5.120e+02</div><div dir="ltr">
</div><div> Data type: </div><div dir="ltr">
</div><div> Data byte order: BIGENDIAN</div><div> </div><div> </div><div dir="ltr">I believe the image file needs to be in little-endian byte order to be read into GATE?</div><div dir="ltr">If so, what is the best way to make the conversion?</div><div dir="ltr"> </div><div dir="ltr"> </div><div dir="ltr">Thank you,</div><div dir="ltr">Mike</div><div dir="ltr">
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