<div dir="ltr"><div><div><div><div><div><div><div><div>Dear Gate users,<br><br></div>I am having some problems with GATE7. I am new at Gate so I apologize if the questions I ask here are basic. I have mainly 3 questions:<br><br></div>(1) In examples/example_PHANTOM_SOURCE/Voxelized_Phantom_Source/ why the data file brain_phantom.i33 is brain_phantom.md5?What is the meaning of md5?<br><br></div>(2) In the same folder, when I try to run mainMacro.mac, it starts normally but than suddenly stops and I receive the message <br>"<b>GateVImageVolume.cc (l.570): I find R=25907 in the image, while range stop at 15</b>"<br></div>What's wrong?<br><br></div>(3) I try to run the same file but with my voxelized source and I receive the following error:<br><br><b>GateSourceVoxelImageReader::ReadFile : fileName: <br>', assuming default BIGENDIAN'LITTLEENDIAN<br><br>'nrecognised type name 'unsigned integer<br>', assuming default BIGENDIAN'BIGENDIAN<br><br>'nrecognised type name 'unsigned integer<br> Header read from 'PET_PVC-MTC.h33'<br> Data file name 'PET_PVC-MTC.i33'<br> Nb of planes: 176<br> Nb of pixels per plane: 448 512<br> Pixel size: 5.273e-01 5.273e-01<br> Slice thickness: 2.086e+00<br> Matrix size: 2.363e+02 2.700e+02<br> Data type: <br> Data byte order: BIGENDIAN<br><br> **** Error: Volume does not exist **** <br> Ignoring confine condition</b><br><br><br></div>and after some lines:<br><br><br><b>*** Break *** segmentation violation</b><br></div><div><br><br><br>My interfile is:<b><br><br>!INTERFILE :=
<br>!imaging modality :=nucmed
<br>!originating system :=ImageJ
<br>!version of keys :=3.3
<br>!date of keys :=1992:01:01
<br>!conversion program :=ImageJ
<br>!program author :=J. Anthony Parker, MD PhD (J.A.Parker@IEEE.org)
<br>!program version :=15January2002
<br>!program date :=2002:01:15
<br>;
<br>!GENERAL DATA :=
<br>original institution := NucMed
<br>!data offset in bytes := 0
<br>!name of data file := PET_PVC-MTC.img
<br>patient name := Unknown
<br>!patient ID := Unknown
<br>patient dob := 0000:00:00
<br>patient sex := Unknown
<br>!study ID := Unknown
<br>exam type := Unknown
<br>data compression := none
<br>data encode := none
<br>organ := Unknown
<br>isotope := Unknown
<br>dose := 0
<br>NUD/Patient Weight [kg] := 0.00
<br>NUD/imaging modality := NM
<br>NUD/activity := 0
<br>NUD/activity start time := 00:00:00
<br>NUD/isotope half life [hours] := 0.000000
<br>;
<br>!GENERAL IMAGE DATA :=
<br>!type of data := Tomographic
<br>!total number of images := 176
<br>study date := 0000:00:00
<br>study time := 00:00:00
<br>imagedata byte order := LITTLEENDIAN
<br>process label :=
<br>;
<br>quantification units := +1.000000e+000
<br>NUD/rescale slope := +1.000000e+000
<br>NUD/rescale intercept := +0.000000e+000
<br>;
<br>number of energy windows := 1
<br>;
<br>energy window [1] :=
<br>energy window lower level [1] :=
<br>energy window upper level [1] :=
<br>flood corrected := N
<br>decay corrected := N
<br>;
<br>!SPECT STUDY (general) :=
<br>number of detector heads := 1
<br>;
<br>!number of images/energy window := 176
<br>!process status := Reconstructed
<br>!matrix size [1] := 512
<br>!matrix size [2] := 448
<br>!number format := unsigned integer
<br>!number of bytes per pixel := 2
<br>scaling factor (mm/pixel) [1] := +5.273440e-001
<br>scaling factor (mm/pixel) [2] := +5.273440e-001
<br>!number of projections := 176
<br>!extent of rotation :=
<br>!time per projection (sec) := 0
<br>study duration (sec) := 0
<br>!maximum pixel count := +2.550000e+002
<br>patient orientation := Unknown
<br>patient rotation := Unknown
<br>;
<br>!SPECT STUDY (reconstructed data) :=
<br>method of reconstruction := Unknown
<br>!number of slices := 176
<br>number of reference frame := 0
<br>slice orientation := unknown
<br>slice thickness (pixels) := +2.085925e+000
<br>centre-centre slice separation (pixels) := +2.085925e+000
<br>filter name := Unknown
<br>filter parameters := Cutoff
<br>method of attenuation correction := measured
<br>scatter corrected := N
<br>oblique reconstruction := N
<br>!END OF INTERFILE :=</b><br><br></div>Can anyone help me please??<br><br></div>Thank you!!<br></div>