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Hello Ana,
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<div>About question 2. You already got a good answer on how to use root for analysis. If you would like to use another program, this link shows how to convert the data in a root-file to a .txt. file for further analysis:</div>
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<div><a href="http://root.cern.ch/phpBB3/viewtopic.php?f=3&t=16590">http://root.cern.ch/phpBB3/viewtopic.php?f=3&t=16590</a> </div>
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<div>Regards!</div>
<div>Jenny Nilsson</div>
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<div>22 okt 2014 kl. 11:05 skrev Vesna Cuplov <<a href="mailto:vesna.cuplov@gmail.com">vesna.cuplov@gmail.com</a>>:</div>
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<div>HI Ana,<br>
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(1) For the definition of the SoftTissue (depends on the organ of interest), you would need to find a reference paper with the SoftTissue
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(brain, liver,....) properties. As an example, in case of optical imaging, I gathered a list of papers:
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<a href="http://wiki.opengatecollaboration.org/index.php/Users_Guide_V7.0:Generating_and_tracking_optical_photons#Bibliography">http://wiki.opengatecollaboration.org/index.php/Users_Guide_V7.0:Generating_and_tracking_optical_photons#Bibliography</a><br>
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<div>What you need depends on the physics you are simulating. <br>
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<div>(2) When you have a root output file, you can use the TTree::MakeClass method from ROOT which generates a skeleton class designed to loop over the entries of a tree from your root file. Some info here:
<a href="http://root.cern.ch/download/doc/ROOTUsersGuideHTML/ch12s21.html">http://root.cern.ch/download/doc/ROOTUsersGuideHTML/ch12s21.html</a><br>
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<div>and here as well: <a href="http://v-cuplov.net/root-analysis/">http://v-cuplov.net/root-analysis/</a><br>
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<div>Hope this helps,<br>
vesna<br>
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<div class="gmail_quote">On Wed, Oct 22, 2014 at 9:28 AM, Ana Margarida Mota <span dir="ltr">
<<a href="mailto:ninimota87@gmail.com" target="_blank">ninimota87@gmail.com</a>></span> wrote:<br>
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<div dir="ltr">Hello Gate-users,</div>
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<div>I wonder If anyone could help me! It was very important!!</div>
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<div dir="ltr">I have two questions:<br>
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<div><span style="font-family:arial,sans-serif;font-size:13px">(1) Does anyone could tell me what is the definition for material 'SoftTissue' to add to the material txt file?</span><br>
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<div><span style="font-family:arial,sans-serif;font-size:13px">(2) How can I "read" or "analyse" what is inside root file(output)?</span></div>
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<div><span style="font-family:arial,sans-serif;font-size:13px">Thank you very much!</span></div>
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<div><span style="font-family:arial,sans-serif;font-size:13px">Regards</span></div>
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