<html> <head> <meta http-equiv="Content-Type" content="text/html; charset=Windows-1252"> </head> <body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;"> <div><br> </div> Dear Leda, <div><br> </div> <div>if I understand the use of ARF correctly, this technique implements</div> <div>a considerable improvement in time usually needed to run</div> <div>a "classical” Gate simulation. It is not a “normal” GATE run, which</div> <div>provides you with all the information which usually is contained</div> <div>in a root file and which takes long to generate. The output from the</div> <div>ARF is the PROJECTION. </div> <div>Maybe it is possible that you create a root file in parallel with ARF</div> <div>when you “generate” the ARF-data with the supplied .mac file,</div> <div>but I haven’t tried it and the real experts should better respond</div> <div>to you question.</div> <div><br> </div> <div>Sorry for not being able to give a more precise answer,</div> <div>but I hope this give a bit of help.</div> <div><br> </div> <div>Kind regards and best wishes.</div> <div><br> </div> <div>Uwe</div> <div> <div> <div><span style="orphans: 2; widows: 2;">/----------------------------------------------------------------------</span></div> <div style="orphans: 2; widows: 2;">Prof. Dr. Uwe Pietrzyk<br> Diplom-Physiker<br> Institut für Neurowissenschaften und Medizin / INM-4<br> Forschungszentrum Jülich GmbH<br> 52425 Jülich<br> Tel: +49-2461-61 4763<br> Fax: +49-2461-61 2820<br> Mobil: +49-162-103-4871<br> eMail: <a href="mailto:U.Pietrzyk@fz-juelich.de">U.Pietrzyk@fz-juelich.de</a><br> <a href="http://www.fz-juelich.de/inm/inm-4/DE/Home/home_node.html">http://www.fz-juelich.de/inm/inm-4/DE/Home/home_node.html</a><br> &<br> Bergische Universität Wuppertal<br> Fachbereich C - Physik / D.08.01<br> Gaußstr. 20<br> 42097 Wuppertal<br> Tel: +49-(0)202-439-3523<br> Fax: +49-(0)202-439-2811<br> eMail: <a href="mailto:Uwe.Pietrzyk@physik.uni-wuppertal.de">Uwe.Pietrzyk@physik.uni-wuppertal.de</a><br> <a href="http://www.medizinphysik.uni-wuppertal.de/">http://www.medizinphysik.uni-wuppertal.de</a><br> ----------------------------------------------------------------------/</div> </div> <br> <div> <div>On 05 Oct 2014, at 11:37, Leda Lorenzon <<a href="mailto:lorenzon.leda88@gmail.com">lorenzon.leda88@gmail.com</a>> wrote:</div> <br class="Apple-interchange-newline"> <blockquote type="cite"> <div dir="ltr"><font face="Times New Roman" size="3"></font> <p style="margin:0cm 0cm 10pt"><span lang="EN-US"><font face="Calibri" size="3">Dear Uwe,</font></span></p> <font face="Times New Roman" size="3"></font> <p style="margin:0cm 0cm 10pt"><span lang="EN-US"><font face="Calibri" size="3">really thank you. The solution works also with my data. </font></span></p> <font face="Times New Roman" size="3"></font> <p style="margin:0cm 0cm 10pt"><span lang="EN-US"><font face="Calibri" size="3">Can I ask you something else? How can I obtain root output?</font></span></p> <font face="Times New Roman" size="3"></font> <p style="margin:0cm 0cm 10pt"><span lang="EN-US"><font face="Calibri" size="3">I tried to add the following lines in useARFTAbles.mac:</font></span></p> <font face="Times New Roman" size="3"></font> <p style="margin:0cm 0cm 10pt"><span lang="EN-US"><font face="Calibri" size="3">/gate/output/root/enable</font></span></p> <font face="Times New Roman" size="3"></font> <p style="margin:0cm 0cm 10pt"><span lang="EN-US"><font face="Calibri" size="3">/gate/output/root/setFileName output</font></span></p> <font face="Times New Roman" size="3"></font> <p style="margin:0cm 0cm 10pt"><span lang="EN-US"><font face="Calibri"><span><font size="3"> </font></span><font size="3">/gate/output/root/setRootSinglesFlag 1</font></font></span></p> <font face="Times New Roman" size="3"></font> <div style="margin: 0cm 0cm 10pt;"><span lang="EN-US"><font face="Calibri" size="3"> </font></span><br class="webkit-block-placeholder"> </div> <font face="Times New Roman" size="3"></font> <p style="margin:0cm 0cm 10pt"><span lang="EN-US"><font face="Calibri" size="3">but I can’t obtain the right output and spectra. </font></span></p> <font face="Times New Roman" size="3"></font> <div style="margin: 0cm 0cm 10pt;"><span lang="EN-US"><font face="Calibri" size="3"> </font></span><br class="webkit-block-placeholder"> </div> <font face="Times New Roman" size="3"></font> <p style="margin:0cm 0cm 10pt"><span lang="EN-US"><font face="Calibri" size="3">Could you please help me?</font></span></p> <font face="Times New Roman" size="3"></font> <div style="margin: 0cm 0cm 10pt;"><span lang="EN-US"><font face="Calibri" size="3"> </font></span><br class="webkit-block-placeholder"> </div> <font face="Times New Roman" size="3"></font> <div style="margin: 0cm 0cm 10pt;"><span lang="EN-US"><font face="Calibri" size="3"> </font></span><br class="webkit-block-placeholder"> </div> <font face="Times New Roman" size="3"></font> <p style="margin:0cm 0cm 10pt"><span lang="EN-US"><font face="Calibri" size="3">Kind regards and best wishes.</font></span></p> <font face="Times New Roman" size="3"></font> <p style="margin:0cm 0cm 10pt"><span lang="EN-US"><font face="Calibri" size="3">Leda Lorenzon</font></span></p> <font face="Times New Roman" size="3"></font> <div style="margin: 0cm 0cm 10pt;"><span lang="EN-US"><font face="Calibri" size="3"> </font></span><br class="webkit-block-placeholder"> </div> <font face="Times New Roman" size="3"></font></div> <div class="gmail_extra"><br> <div class="gmail_quote">2014-10-03 23:24 GMT+02:00 Pietrzyk, Uwe <span dir="ltr"> <<a href="mailto:u.pietrzyk@fz-juelich.de" target="_blank">u.pietrzyk@fz-juelich.de</a>></span>:<br> <blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"> <div style=""> <div><br> </div> <div>Dear Leda,</div> <div><br> </div> <div>sorry for the delay! I had some busy days, but I now can point</div> <div>you to a solution. As you can see in the attached files, I specified</div> <div>the image type as 64-bit real. I found it by calculating the number of</div> <div>expected byte in the projection file (*.sin) and unlike what is given in the</div> <div>header file, this image type seems to be the one that provides with</div> <div>the expected image from a point source. In the case I have attached,</div> <div>I have reduced the number of heads to just a single one, to have</div> <div>a more simple situation. But I also checked it for 4 heads and the</div> <div>result is fine. Please try with your data.</div> <div><br> </div> I hope this is helpful! <span> <div><br> </div> <div>Kind regards and best wishes,</div> <div><br> </div> <div>Uwe</div> </span> <div><span><br> <div> <div><span>/----------------------------------------------------------------------</span></div> <div>Prof. Dr. Uwe Pietrzyk<br> Diplom-Physiker<br> Institut für Neurowissenschaften und Medizin / INM-4<br> Forschungszentrum Jülich GmbH<br> 52425 Jülich<br> Tel: <a href="tel:%2B49-2461-61%204763" target="_blank" value="+492461614763">+49-2461-61 4763</a><br> Fax: <a href="tel:%2B49-2461-61%202820" target="_blank" value="+492461612820">+49-2461-61 2820</a><br> Mobil: <a href="tel:%2B49-162-103-4871" target="_blank" value="+491621034871">+49-162-103-4871</a><br> eMail: <a href="mailto:U.Pietrzyk@fz-juelich.de" target="_blank">U.Pietrzyk@fz-juelich.de</a><br> <a href="http://www.fz-juelich.de/inm/inm-4/DE/Home/home_node.html" target="_blank">http://www.fz-juelich.de/inm/inm-4/DE/Home/home_node.html</a><br> &<br> Bergische Universität Wuppertal<br> Fachbereich C - Physik / D.08.01<br> Gaußstr. 20<br> 42097 Wuppertal<br> Tel: <a href="tel:%2B49-%280%29202-439-3523" target="_blank" value="+492024393523"> +49-(0)202-439-3523</a><br> Fax: <a href="tel:%2B49-%280%29202-439-2811" target="_blank" value="+492024392811"> +49-(0)202-439-2811</a><br> eMail: <a href="mailto:Uwe.Pietrzyk@physik.uni-wuppertal.de" target="_blank">Uwe.Pietrzyk@physik.uni-wuppertal.de</a><br> <a href="http://www.medizinphysik.uni-wuppertal.de/" target="_blank">http://www.medizinphysik.uni-wuppertal.de</a><br> ----------------------------------------------------------------------/</div> </div> <div><br> </div> <div><br> </div> <div></div> <div><br> </div> <div><br> </div> <br> </span> <div><span> <div>On 01 Oct 2014, at 13:21, Leda Lorenzon <<a href="mailto:lorenzon.leda88@gmail.com" target="_blank">lorenzon.leda88@gmail.com</a>> wrote:</div> <br> </span> <blockquote type="cite"> <div dir="ltr"> <div>Dear Uwe,</div> <div> <div class="h5"> <div>I apologize for the insistence. Have you find some mistakes in my macro files? </div> <div><br> </div> <div>Really thank you.</div> <div>Kind regards and best wishes,</div> <div>Leda Lorenzon<br> </div> <div><br> </div> </div> </div> </div> <div> <div class="h5"> <div class="gmail_extra"><br> <div class="gmail_quote">2014-09-10 10:20 GMT+02:00 Leda Lorenzon <span dir="ltr"> <<a href="mailto:lorenzon.leda88@gmail.com" target="_blank">lorenzon.leda88@gmail.com</a>></span>:<br> <blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;padding-left:1ex;border-left-color:rgb(204,204,204);border-left-width:1px;border-left-style:solid"> <div>Dear Uwe,</div> <div>I send you the macro-files I used. I did not produce the root-files.</div> <div> </div> <div>Really thank you.</div> <div><span> <div>Kind regards and best wishes,</div> </span> <div>Leda</div> </div> <div><br> </div> <div class="gmail_quote">2014-09-10 8:05 GMT+02:00 Pietrzyk, Uwe <span dir="ltr"> <<a href="mailto:u.pietrzyk@fz-juelich.de" target="_blank">u.pietrzyk@fz-juelich.de</a>></span>: <div> <div><br> <blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;padding-left:1ex;border-left-color:rgb(204,204,204);border-left-width:1px;border-left-style:solid"> <div> <div><br> </div> Dear Leda, <div><br> </div> <div>could you send me the macro-files (*.mac) you are using</div> <div>to have a direkt look at the output. Did you also produce</div> <div>root-files and did you look at the data through ROOT to check</div> <div>they look consistent?</div> <div><br> </div> <div>Kind regards and best wishes,</div> <div><br> </div> <div>Uwe<span><br> <div> <div><span>/----------------------------------------------------------------------</span></div> <div>Prof. Dr. Uwe Pietrzyk<br> Diplom-Physiker<br> Institut für Neurowissenschaften und Medizin / INM-4<br> Forschungszentrum Jülich GmbH<br> 52425 Jülich<br> Tel: <a href="tel:%2B49-2461-61%204763" target="_blank" value="+492461614763">+49-2461-61 4763</a><br> Fax: <a href="tel:%2B49-2461-61%202820" target="_blank" value="+492461612820">+49-2461-61 2820</a><br> Mobil: <a href="tel:%2B49-162-103-4871" target="_blank" value="+491621034871">+49-162-103-4871</a><br> eMail: <a href="mailto:U.Pietrzyk@fz-juelich.de" target="_blank">U.Pietrzyk@fz-juelich.de</a><br> <a href="http://www.fz-juelich.de/inm/inm-4/DE/Home/home_node.html" target="_blank">http://www.fz-juelich.de/inm/inm-4/DE/Home/home_node.html</a><br> &<br> Bergische Universität Wuppertal<br> Fachbereich C - Physik / D.08.01<br> Gaußstr. 20<br> 42097 Wuppertal<br> Tel: <a href="tel:%2B49-%280%29202-439-3523" target="_blank" value="+492024393523"> +49-(0)202-439-3523</a><br> Fax: <a href="tel:%2B49-%280%29202-439-2811" target="_blank" value="+492024392811"> +49-(0)202-439-2811</a><br> eMail: <a href="mailto:Uwe.Pietrzyk@physik.uni-wuppertal.de" target="_blank">Uwe.Pietrzyk@physik.uni-wuppertal.de</a><br> <a href="http://www.medizinphysik.uni-wuppertal.de/" target="_blank">http://www.medizinphysik.uni-wuppertal.de</a><br> ----------------------------------------------------------------------/</div> </div> <br> </span></div> </div> </blockquote> </div> </div> </div> </blockquote> </div> </div> </div> </div> </blockquote> </div> <br> </div> <br> <span><font face="Arial" size="1"><br> ------------------------------------------------------------------------------------------------<br> ------------------------------------------------------------------------------------------------<br> Forschungszentrum Juelich GmbH<br> 52425 Juelich<br> Sitz der Gesellschaft: Juelich<br> Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. 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