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Dear Dr. Sahoo,
<div><br>
</div>
<div>this is not an EduGATE or GATE problem. The following lines</div>
<div>which I have copied below from your output, simply tell you</div>
<div>that G4LEDATA is not set and maybe the data are simply missing.</div>
<div>Please check the folder where GEANT4 wantsto find the data files it</div>
<div>needs for the simulation. Obviously, something is missing.</div>
<div><br>
</div>
<div>Concerning EduGATE, there will be more examples soon and</div>
<div>the older ones probably need to be maintained for GATE 6.2 and 7.0.</div>
<div>We will let you know, when this has happened.</div>
<div><br>
</div>
<div>Kind regards and best wishes,</div>
<div><br>
</div>
<div>Uwe Pietrzyk</div>
<div><br>
</div>
<div>
<blockquote type="cite">
<div dir="ltr"><br>
-------- EEEE ------- G4Exception-START -------- EEEE -------<br>
*** G4Exception : em0006<br>
issued by : G4SeltzerBergerModel::ReadData()<br>
Environment variable G4LEDATA not defined<br>
*** Fatal Exception *** core dump ***<br>
-------- EEEE -------- G4Exception-END --------- EEEE ———<br>
<br>
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<br>
<div>
<div><span style="orphans:2; widows:2">/----------------------------------------------------------------------</span></div>
<div style="orphans:2; widows:2">Prof. Dr. Uwe Pietrzyk<br>
Diplom-Physiker<br>
Institut für Neurowissenschaften und Medizin / INM-4<br>
Forschungszentrum Jülich GmbH<br>
52425 Jülich<br>
Tel: +49-2461-61 4763<br>
Fax: +49-2461-61 2820<br>
Mobil: +49-162-103-4871<br>
eMail: <a href="mailto:U.Pietrzyk@fz-juelich.de">U.Pietrzyk@fz-juelich.de</a><br>
<a href="http://www.fz-juelich.de/inm/inm-4/DE/Home/home_node.html">http://www.fz-juelich.de/inm/inm-4/DE/Home/home_node.html</a><br>
&<br>
Bergische Universität Wuppertal<br>
Fachbereich C - Physik / D.08.01<br>
Gaußstr. 20<br>
42097 Wuppertal<br>
Tel: +49-(0)202-439-3523<br>
Fax: +49-(0)202-439-2811<br>
eMail: <a href="mailto:Uwe.Pietrzyk@physik.uni-wuppertal.de">Uwe.Pietrzyk@physik.uni-wuppertal.de</a><br>
<a href="http://www.medizinphysik.uni-wuppertal.de/">http://www.medizinphysik.uni-wuppertal.de</a><br>
----------------------------------------------------------------------/</div>
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<br>
<div>
<div>On 12 May 2014, at 09:24, Debendranath Sahoo <<a href="mailto:deba999@gmail.com">deba999@gmail.com</a>> wrote:</div>
<br class="Apple-interchange-newline">
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<div>May 12<br>
</div>
<div>Puttaparthy<br>
</div>
<div><br>
Dear Dr Pietrzyk,<br>
<br>
</div>
I am stuck at running your example in Edugate. I shall be most grateful if you could advise me how to make it run. What I got on my terminal is copied below.
<br>
<div><br>
Also, do youu have any upgradation of Edugate?<br>
<br>
Sincerely yours,<br>
<br>
</div>
<div>D. Sahoo<br>
</div>
<div><br>
<br>
ds@ananth-Precision-T5600:~/Desktop/gate-learning/EduGATE_15112011/Gamma_Camera$ Gate Gamma_Camera.mac<br>
[G4] <br>
[G4] *************************************************************<br>
[G4] Geant4 version Name: geant4-09-05-patch-02 (22-October-2012)<br>
[G4] Copyright : Geant4 Collaboration<br>
[G4] Reference : NIM A 506 (2003), 250-303<br>
[G4] WWW : <a href="http://cern.ch/geant4">http://cern.ch/geant4</a><br>
[G4] *************************************************************<br>
[G4] <br>
[Core-0] Initialization of geometry<br>
[Core-0] Initialization of physics<br>
[Core-0] Initialization of actors<br>
[Core-0] <br>
[Core-0] **********************************************************************<br>
[Core-0] GATE version name: gate_v6.2 <br>
[Core-0] Copyright : OpenGATE Collaboration <br>
[Core-0] Reference : Phys. Med. Biol. 49 (2004) 4543-4561 <br>
[Core-0] Reference : Phys. Med. Biol. 56 (2011) 881-901 <br>
[Core-0] WWW : <a href="http://www.opengatecollaboration.org/">
http://www.opengatecollaboration.org</a> <br>
[Core-0] **********************************************************************<br>
[Core-0] <br>
[Core-0] Starting macro Gamma_Camera.mac<br>
G4OpenGLXViewer: XLoadQueryFont failed for font<br>
-adobe-courier-bold-r-normal--10-100-75-75-m-60-iso8859-1<br>
G4OpenGLXViewer: XLoadQueryFont failed for font<br>
-adobe-courier-bold-r-normal--11-80-100-100-m-60-iso8859-1<br>
G4OpenGLXViewer: XLoadQueryFont failed for font<br>
-adobe-courier-bold-r-normal--12-120-75-75-m-70-iso8859-1<br>
G4OpenGLXViewer: XLoadQueryFont failed for font<br>
-adobe-courier-bold-r-normal--14-100-100-100-m-90-iso8859-1<br>
G4OpenGLXViewer: XLoadQueryFont failed for font<br>
-adobe-courier-bold-r-normal--17-120-100-100-m-100-iso8859-1<br>
G4OpenGLXViewer: XLoadQueryFont failed for font<br>
-adobe-courier-bold-r-normal--18-180-75-75-m-110-iso8859-1<br>
G4OpenGLXViewer: XLoadQueryFont failed for font<br>
-adobe-courier-bold-r-normal--20-140-100-100-m-110-iso8859-1<br>
G4OpenGLXViewer: XLoadQueryFont failed for font<br>
-adobe-courier-bold-r-normal--24-240-75-75-m-150-iso8859-1<br>
G4OpenGLXViewer: XLoadQueryFont failed for font<br>
-adobe-courier-bold-r-normal--25-180-100-100-m-150-iso8859-1<br>
G4OpenGLXViewer: XLoadQueryFont failed for font<br>
-adobe-courier-bold-r-normal--34-240-100-100-m-200-iso8859-1<br>
/tracking/storeTrajectory 1<br>
Attributes available for modeling and filtering with<br>
"/vis/modeling/trajectories/create/drawByAttribute" and<br>
"/vis/filtering/trajectories/create/attributeFilter" commands:<br>
G4Trajectory:<br>
Charge (Ch): unit: e+ (G4double)<br>
Track ID (ID): G4int<br>
Initial kinetic energy (IKE): G4BestUnit (G4double)<br>
Initial momentum magnitude (IMag): G4BestUnit (G4double)<br>
Initial momentum (IMom): G4BestUnit (G4ThreeVector)<br>
No. of points (NTP): G4int<br>
PDG Encoding (PDG): G4int<br>
Parent ID (PID): G4int<br>
Particle Name (PN): G4String<br>
G4TrajectoryPoint:<br>
Position (Pos): G4BestUnit (G4ThreeVector)<br>
WARNING: Trajectory storing has been requested. This action may be<br>
reversed with "/tracking/storeTrajectory 0".<br>
WARNING: The vis manager will keep up to 20 events.<br>
This may use a lot of memory.<br>
It may be changed with, e.g., "/vis/scene/endOfEventAction accumulate 10".<br>
GateDetectorConstruction::insertARFSD entered <br>
created a ARF Sensivitive Detector <br>
created command /gate/systems/SPECThead/arf/setARFStage<br>
ABSLENGTH<br>
1.84e-06 50000<br>
4.08e-06 50000<br>
RINDEX<br>
1.84e-06 1.00028<br>
4.08e-06 1.00028<br>
GetDirectoryName()+ setHeight = /gate/hole/geometry/setHeight<br>
<br>
GATE object: 'systems/SPECThead'<br>
Components: <br>
<br>
GATE object: 'systems/SPECThead/base'<br>
Attached to volume: SPECThead<br>
Nb of children: 1<br>
<br>
GATE object: 'systems/SPECThead/crystal'<br>
Attached to volume: crystal<br>
Nb of children: 1<br>
<br>
GATE object: 'systems/SPECThead/pixel'<br>
Attached to volume: ---<br>
<!> *** WARNING *** <!> Unknown process: MultipleScattering<br>
<!> *** WARNING *** <!> Unknown process: MultipleScattering<br>
<br>
<br>
List of Enabled processes:<br>
<br>
<br>
=== Process: PhotoElectric ===<br>
Particle: gamma<br>
* Model(s):<br>
- StandardModel<br>
<br>
=== Process: RadioactiveDecay ===<br>
Particle: GenericIon<br>
<br>
=== Process: RayleighScattering ===<br>
Particle: gamma<br>
* Model(s):<br>
- PenelopeModel<br>
<br>
=== Process: Bremsstrahlung ===<br>
Particle: e+<br>
* Model(s):<br>
- StandardModel<br>
Particle: e-<br>
* Model(s):<br>
- StandardModel<br>
<br>
=== Process: Compton ===<br>
Particle: gamma<br>
* Model(s):<br>
- StandardModel<br>
<br>
=== Process: PositronAnnihilation ===<br>
Particle: e+<br>
<br>
=== Process: ElectronIonisation ===<br>
Particle: e+<br>
* Model(s):<br>
- StandardModel<br>
Particle: e-<br>
* Model(s):<br>
- StandardModel<br>
<br>
<br>
<br>
<br>
List of initialized processes:<br>
<br>
<br>
<br>
[Core-0] Initialization of geometry<br>
Nb of children: 0<br>
G4PhysicalVolumeModel::Validate(): A volume of the same name and<br>
copy number ("world_phys", copy 0) still exists and is being used.<br>
But it is not the same volume you originally specified<br>
in /vis/scene/add/.<br>
[Core-0] Initialization of physics<br>
[Core-0] Initialization of actors<br>
GateSourceMgr::ListSources: List of the sources in the source manager<br>
Source --------------> GammaSource<br>
ID : 0<br>
type : gps<br>
activity (Bq) : 1000<br>
startTime (s) : 0<br>
time (s) : 0<br>
forcedUnstable : 0<br>
forcedHalfLife (s) : -0.693147<br>
verboseLevel : 0<br>
relative to vol : World<br>
---------------------- <br>
<br>
Source --------------> GammaSource2<br>
ID : 1<br>
type : gps<br>
activity (Bq) : 1000<br>
startTime (s) : 0<br>
time (s) : 0<br>
forcedUnstable : 0<br>
forcedHalfLife (s) : -0.693147<br>
verboseLevel : 0<br>
relative to vol : World<br>
---------------------- <br>
<br>
Source --------------> GammaSource3<br>
ID : 2<br>
type : gps<br>
activity (Bq) : 1000<br>
startTime (s) : 0<br>
time (s) : 0<br>
forcedUnstable : 0<br>
forcedHalfLife (s) : -0.693147<br>
verboseLevel : 0<br>
relative to vol : World<br>
---------------------- <br>
<br>
Confirming confinement to volume 'source_vol_phys'...<br>
Confirming confinement to volume 'source_vol_phys'...<br>
Confirming confinement to volume 'source_vol_phys'...<br>
[Acquisition-0] <br>
[Acquisition-0] ============= Source initialization =============<br>
[Acquisition-0] <br>
[Acquisition-0] ============= Acquisition starts! =============<br>
[Acquisition-0] Simulation start time = 0 sec<br>
[Acquisition-0] Simulation end time = 10 sec<br>
[Acquisition-0] Simulation will have = 10 run(s)<br>
<br>
--------- Ranlux engine status ---------<br>
Initial seed = -3175806219143625068<br>
randoms[] = 0.764525<br>
0.140098<br>
0.984555<br>
0.742315<br>
0.863656<br>
0.187727<br>
0.185775<br>
0.306394<br>
0.817862<br>
0.767398<br>
0.236854<br>
0.879323<br>
<br>
carry = 0, index = 8<br>
luxury = 1 pDiscard = 202<br>
----------------------------------------<br>
[Acquisition-0] <br>
[Acquisition-0] Slice 0 from 0 to 1 s [slice=1 s], final stop at 10 s.<br>
<br>
-------- EEEE ------- G4Exception-START -------- EEEE -------<br>
*** G4Exception : em0006<br>
issued by : G4SeltzerBergerModel::ReadData()<br>
Environment variable G4LEDATA not defined<br>
*** Fatal Exception *** core dump ***<br>
-------- EEEE -------- G4Exception-END --------- EEEE -------<br>
<br>
<br>
*** G4Exception: Aborting execution ***<br>
Aborted (core dumped)<br>
ds@ananth-Precision-T5600:~/Desktop/gate-learning/EduGATE_15112011/Gamma_Camera$ <br>
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-- <br>
<i><b>Dr Debendranath Sahoo</b></i><br>
Honorary Professor<br>
Physics Department<br>
Sri Sathya Sai Institute of Higher Learning<br>
Prashanthi Nilayam<br>
Puttaparthy<br>
A.P. 515 134<br>
e-mail: <a href="mailto:deba999@gmail.com" target="_blank">deba999@gmail.com</a><br>
Mobile: <b>094945-43026</b><br>
<br>
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