<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0 TRANSITIONAL//EN">
<HTML>
<HEAD>
<META HTTP-EQUIV="Content-Type" CONTENT="text/html; CHARSET=UTF-8">
<META NAME="GENERATOR" CONTENT="GtkHTML/4.2.2">
</HEAD>
<BODY>
Hello<BR>
<BR>
This problem has nothing to do with gjs.<BR>
It seems your cluster does not know where to look for the library. Are you sending along the environmental variables?<BR>
<BR>
Cheers,<BR>
Hermann<BR>
On Thu, 2013-06-13 at 21:59 +0800, 刘斌信件 wrote:
<BLOCKQUOTE TYPE=CITE>
<PRE>
hi David,
I try to use cluster tools "gjs", I utilize the commands " gjs -numberofsplits 5 -clusterplatform openmosix mac/total.mac , and got the output file of " total.submit ", but when I execut the it by "sudo ./total.submit"
the errors are coming , the folllowing are output:
/Gatedir/bin/Linux-g++/Gate : error while loading shared libraries: libGate.so: cannot open shared object file: No such file or directory?
I found the libGate.so in the file directory "${GATEHOME}/tmp/${G4SYSTEM}/Gate" ,and I added the directory to the PATH or LD_LIBRARY_PATH , however the problem is still there , I don't know what cause this problem.
Another prblem is the vv, I used Vv converting Ct.dcm data to .hdr or img data ,but the derived .hdr file cann't supported by Gate , it showed that the Gate didn't support voxel type of converted file " .hdr" .
Can you give me a help .
Best wishes
yours
Bin.
----- Original Message -----
From: <<A HREF="mailto:gate-users-request@lists.opengatecollaboration.org">gate-users-request@lists.opengatecollaboration.org</A>>
To: <<A HREF="mailto:gate-users@lists.opengatecollaboration.org">gate-users@lists.opengatecollaboration.org</A>>
Sent: Saturday, June 08, 2013 6:00 PM
Subject: Gate-users Digest, Vol 85, Issue 6
> Send Gate-users mailing list submissions to
> <A HREF="mailto:gate-users@lists.opengatecollaboration.org">gate-users@lists.opengatecollaboration.org</A>
>
> To subscribe or unsubscribe via the World Wide Web, visit
> <A HREF="http://lists.opengatecollaboration.org/mailman/listinfo/gate-users">http://lists.opengatecollaboration.org/mailman/listinfo/gate-users</A>
> or, via email, send a message with subject or body 'help' to
> <A HREF="mailto:gate-users-request@lists.opengatecollaboration.org">gate-users-request@lists.opengatecollaboration.org</A>
>
> You can reach the person managing the list at
> <A HREF="mailto:gate-users-owner@lists.opengatecollaboration.org">gate-users-owner@lists.opengatecollaboration.org</A>
>
> When replying, please edit your Subject line so it is more specific
> than "Re: Contents of Gate-users digest..."
>
>
> Today's Topics:
>
> 1. LMF segment fault (??)
>
>
> ----------------------------------------------------------------------
>
> Message: 1
> Date: Fri, 7 Jun 2013 21:37:57 +0800 (GMT+08:00)
> From: ?? <<A HREF="mailto:chenze@impcas.ac.cn">chenze@impcas.ac.cn</A>>
> To: <A HREF="mailto:gate-users@lists.opengatecollaboration.org">gate-users@lists.opengatecollaboration.org</A>
> Subject: [Gate-users] LMF segment fault
> Message-ID: <<A HREF="mailto:c4cd2a.a207.13f1edb9f4b.Coremail.chenze@impcas.ac.cn">c4cd2a.a207.13f1edb9f4b.Coremail.chenze@impcas.ac.cn</A>>
> Content-Type: text/plain; charset="gbk"
>
>
> Hi,
> I have occurred the the problem of LMF output, which is shown below.
> **************
> LMF INIT
> **************
> number of rsectors 1
> rsector name =rsector
>
> *** Break *** segmentation violation
> I wonder how can I fix this problem, thank you for your reply.
> regards,
> chenze
>
>
>
>
> -------------- next part --------------
> An HTML attachment was scrubbed...
> URL: <<A HREF="http://lists.opengatecollaboration.org/mailman/private/gate-users/attachments/20130607/3d3dada2/attachment-0001.html">http://lists.opengatecollaboration.org/mailman/private/gate-users/attachments/20130607/3d3dada2/attachment-0001.html</A>>
>
> ------------------------------
>
> _______________________________________________
> Gate-users mailing list
> <A HREF="mailto:Gate-users@lists.opengatecollaboration.org">Gate-users@lists.opengatecollaboration.org</A>
> <A HREF="http://lists.opengatecollaboration.org/mailman/listinfo/gate-users">http://lists.opengatecollaboration.org/mailman/listinfo/gate-users</A>
>
> End of Gate-users Digest, Vol 85, Issue 6
> *****************************************
_______________________________________________
Gate-users mailing list
<A HREF="mailto:Gate-users@lists.opengatecollaboration.org">Gate-users@lists.opengatecollaboration.org</A>
<A HREF="http://lists.opengatecollaboration.org/mailman/listinfo/gate-users">http://lists.opengatecollaboration.org/mailman/listinfo/gate-users</A>
</PRE>
</BLOCKQUOTE>
<BR>
<TABLE CELLSPACING="0" CELLPADDING="0" WIDTH="100%">
<TR>
<TD>
<PRE>
--
-------------
DI Hermann Fuchs
Christian Doppler Laboratory for Medical Radiation Research for Radiation Oncology
Department of Radiation Oncology
Medical University Vienna
Währinger Gürtel 18-20
A-1090 Wien
Tel. + 43 / 1 / 40 400 7271
Mail. <A HREF="mailto:hermann.fuchs@meduniwien.ac.at">hermann.fuchs@meduniwien.ac.at</A>
</PRE>
</TD>
</TR>
</TABLE>
</BODY>
</HTML>