<html xmlns:v="urn:schemas-microsoft-com:vml" xmlns:o="urn:schemas-microsoft-com:office:office" xmlns:w="urn:schemas-microsoft-com:office:word" xmlns:m="http://schemas.microsoft.com/office/2004/12/omml" xmlns="http://www.w3.org/TR/REC-html40"> <head> <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1"> <meta name="Generator" content="Microsoft Word 12 (filtered medium)"> <style></style> </head> <body lang="DE" link="blue" vlink="purple"> <div class="WordSection1"> <p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D">Hello Ismet,<o:p></o:p></span></p> <p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D"><o:p> </o:p></span></p> <p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D">I haven’t tried myself for the new version yet, so this is just a guess based on past experience: I remember that I had problems linking Gate when using the ‘make”-command together with the “job” (-j)-switch. On my machine it seemed that some compilation jobs needed for linking (or for compiling other parts of Gate) had not finished when the next free job tried to link or compile something that needed other finished compilation jobs already. Thus I suggest to try to make process without any ‘-j’-switch. It will take longer but might get rid of the error(s) you have encountered.<o:p></o:p></span></p> <p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D"><o:p> </o:p></span></p> <p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D">Good luck,<o:p></o:p></span></p> <p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D"><o:p> </o:p></span></p> <p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D">Wolf<o:p></o:p></span></p> <p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D"><o:p> </o:p></span></p> <div> <p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif";color:black"><o:p> </o:p></span></p> <p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif";color:black"><o:p> </o:p></span></p> <p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Arial","sans-serif";color:black">Dr. Wolfram Stiller<o:p></o:p></span></p> <p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Arial","sans-serif";color:black">Diplom-Physiker<o:p></o:p></span></p> <p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Arial","sans-serif";color:black"><o:p> </o:p></span></p> <p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Arial","sans-serif";color:black">Universitätsklinikum Heidelberg<o:p></o:p></span></p> <p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Arial","sans-serif";color:black">Abteilung für Diagnostische und Interventionelle Radiologie<o:p></o:p></span></p> <p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Arial","sans-serif";color:black">Im Neuenheimer Feld 110<o:p></o:p></span></p> <p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Arial","sans-serif";color:black">D-69120 Heidelberg<o:p></o:p></span></p> <p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Arial","sans-serif";color:black">Germany<o:p></o:p></span></p> <p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Arial","sans-serif";color:#1F497D"><o:p> </o:p></span></p> <p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Arial","sans-serif";color:#1F497D">E-mail:</span><span style="font-size:10.0pt;font-family:"Arial","sans-serif";color:#1F497D"> </span><span style="color:#1F497D"><a href="mailto:w.stiller@dkfz-heidelberg.de"><span style="font-size:10.0pt;font-family:"Arial","sans-serif";color:blue">wolfram.stiller@med.uni-heidelberg.de</span></a></span><span style="font-size:10.0pt;font-family:"Arial","sans-serif";color:#1F497D"><o:p></o:p></span></p> <p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Arial","sans-serif";color:#1F497D"><o:p> </o:p></span></p> <p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Arial","sans-serif";color:#1F497D">Tel.: +49 (0) 6221 56 37240 or<o:p></o:p></span></p> <p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Arial","sans-serif";color:#1F497D"> +49 (0) 6221 56 6434<o:p></o:p></span></p> <p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Arial","sans-serif";color:#1F497D"><o:p> </o:p></span></p> <p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Arial","sans-serif";color:#1F497D"><o:p> </o:p></span></p> <p class="MsoNormal"><span style="font-size:8.0pt;font-family:"Arial","sans-serif";color:#1F497D">Diese E-Mail enthält vertrauliche und/oder rechtlich geschützte Informationen. 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Any unauthorized copying, disclosure or distribution of the material in this e-mail is strictly forbidden.<o:p></o:p></span></p> </div> <p class="MsoNormal"><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D"><o:p> </o:p></span></p> <div> <div style="border:none;border-top:solid #B5C4DF 1.0pt;padding:3.0pt 0cm 0cm 0cm"> <p class="MsoNormal"><b><span style="font-size:10.0pt;font-family:"Tahoma","sans-serif"">Von:</span></b><span style="font-size:10.0pt;font-family:"Tahoma","sans-serif""> gate-users-bounces@lists.opengatecollaboration.org [mailto:gate-users-bounces@lists.opengatecollaboration.org] <b>Im Auftrag von </b>Ismet Isnaini<br> <b>Gesendet:</b> Montag, 17. September 2012 10:45<br> <b>An:</b> GATE mailist<br> <b>Betreff:</b> [Gate-users] error in gate6.2 installation<o:p></o:p></span></p> </div> </div> <p class="MsoNormal"><o:p> </o:p></p> <div> <div> <p class="MsoNormal" style="background:white"><span style="font-family:"Arial","sans-serif";color:black">Hi everyone, <o:p></o:p></span></p> </div> <div> <p class="MsoNormal"><span style="font-family:"Arial","sans-serif";color:black"><o:p> </o:p></span></p> </div> <div> <p class="MsoNormal"><span style="font-family:"Arial","sans-serif";color:black">I am trying to install the new Gate 6.2 on Ubuntu 12.04<o:p></o:p></span></p> </div> <div> <p class="MsoNormal"><span style="font-family:"Arial","sans-serif";color:black"><o:p> </o:p></span></p> </div> <div> <p class="MsoNormal"><span style="font-family:"Arial","sans-serif";color:black">I have the following error when trying to install the Gate<o:p></o:p></span></p> </div> <div> <p class="MsoNormal"><span style="font-family:"Arial","sans-serif";color:black"><o:p> </o:p></span></p> </div> <div> <p class="MsoNormal"><span style="font-family:"Arial","sans-serif";color:black">make -j4<o:p></o:p></span></p> </div> <div> <p class="MsoNormal"><span style="font-family:"Arial","sans-serif";color:black"><o:p> </o:p></span></p> </div> <div> <p class="MsoNormal"><span style="font-family:"Arial","sans-serif";color:black">the following error (and many more) appeared.. <o:p></o:p></span></p> </div> <div> <p class="MsoNormal"><span style="font-family:"Arial","sans-serif";color:black"><o:p> </o:p></span></p> </div> <div> <p class="MsoNormal"><span style="font-family:"Arial","sans-serif";color:black">[ 2%] Built target itkzlib<br> [ 7%] Built target ITKMetaIO<br> Linking CXX executable /home/ismet/gate_v6.2/Gate<br> /home/ismet/geant4.9.5.p01-install/lib/libG4FR.so: error: undefined reference to 'HepGeom::Point3D<double>::transform(HepGeom::Transform3D const&)'<br> /home/ismet/geant4.9.5.p01-install/lib/libG4GMocren.so: error: undefined reference to 'CLHEP::HepRotation::setPhi(double)'<br> /home/ismet/geant4.9.5.p01-install/lib/libG4GMocren.so: error: undefined reference to 'HepGeom::Transform3D::Identity'<br> /home/ismet/geant4.9.5.p01-install/lib/libG4GMocren.so: error: undefined reference to 'HepGeom::Transform3D::inverse() const'<br> /home/ismet/geant4.9.5.p01-install/lib/libG4GMocren.so: error: undefined reference to 'CLHEP::Hep3Vector::transform(CLHEP::HepRotation const&)'<br> /home/ismet/geant4.9.5.p01-install/lib/libG4GMocren.so: error: undefined reference to 'HepGeom::Transform3D::operator*(HepGeom::Transform3D const&) const'<br> /home/ismet/geant4.9.5.p01-install/lib/libG4GMocren.so: error: undefined reference to 'CLHEP::HepRotation::IDENTITY'<br> /home/ismet/geant4.9.5.p01-install/lib/libG4GMocren.so: error: undefined reference to 'CLHEP::HepRotation::HepRotation(CLHEP::Hep3Vector const&, double)'<br> /home/ismet/geant4.9.5.p01-install/lib/libG4visHepRep.so: error: undefined reference to 'CLHEP::HepRotation::phiX() const'<o:p></o:p></span></p> </div> <div> <p class="MsoNormal"><span style="font-family:"Arial","sans-serif";color:black"><o:p> </o:p></span></p> </div> <div> <p class="MsoNormal"><span style="font-family:"Arial","sans-serif";color:black"><o:p> </o:p></span></p> </div> <div> <p class="MsoNormal"><span style="font-family:"Arial","sans-serif";color:black"><o:p> </o:p></span></p> </div> <div> <p class="MsoNormal"><span style="font-family:"Arial","sans-serif";color:black">Anybody have any idea what is going on ? <o:p></o:p></span></p> </div> <div> <p class="MsoNormal"><span style="font-family:"Arial","sans-serif";color:black"><o:p> </o:p></span></p> </div> <div> <p class="MsoNormal"><span style="font-family:"Arial","sans-serif";color:black">your help is really appreciated.. <o:p></o:p></span></p> </div> <div> <p class="MsoNormal"><span style="font-family:"Arial","sans-serif";color:black"><o:p> </o:p></span></p> </div> <div> <p class="MsoNormal"><span style="font-family:"Arial","sans-serif";color:black">regards<o:p></o:p></span></p> </div> <div> <p class="MsoNormal"><span style="font-family:"Arial","sans-serif";color:black"><o:p> </o:p></span></p> </div> <div> <p class="MsoNormal"><span style="font-family:"Arial","sans-serif";color:black"><o:p> </o:p></span></p> </div> </div> </div> </body> </html>