The current value of G4INSTALL is: /home/jahdasa/GATE-ROOT/geant4_9_4_p03 The current value of G4VERSION is: 9.4 Launching Geant4 configuration script /home/jahdasa/GATE-ROOT/geant4_9_4_p03/env.sh On this machine the G4SYSTEM=Linux-g++ On this machine the G4INSTALL=/home/jahdasa/GATE-ROOT/geant4_9_4_p03 On this machine the G4LIB=/home/jahdasa/GATE-ROOT/geant4_9_4_p03/lib On this machine the G4LEVELGAMMADATA=/home/jahdasa/GATE-ROOT/geant4_9_4_p03/data/PhotonEvaporation2.1 On this machine the G4RADIOACTIVEDATA=/home/jahdasa/GATE-ROOT/geant4_9_4_p03/data/RadioactiveDecay3.3 On this machine the G4LEDATA=/home/jahdasa/GATE-ROOT/geant4_9_4_p03/data/G4EMLOW6.19 On this machine the G4NEUTRONHPDATA=/home/jahdasa/GATE-ROOT/geant4_9_4_p03/data/G4NDL3.14 On this machine the G4ABLADATA=/home/jahdasa/GATE-ROOT/geant4_9_4_p03/data/G4ABLA3.0 On this machine the G4REALSURFACEDATA=/home/jahdasa/GATE-ROOT/geant4_9_4_p03/data/RealSurface1.0 On this machine the G4NEUTRONXSDATA=/home/jahdasa/GATE-ROOT/geant4_9_4_p03/data/G4NEUTRONXS1.0 On this machine the G4PIIDATA=/home/jahdasa/GATE-ROOT/geant4_9_4_p03/data/G4PII1.2 On this machine the CLHEP_BASE_DIR=/home/jahdasa/GATE-ROOT/2.1.0.1 On this machine the CLHEP_INCLUDE_DIR=/home/jahdasa/GATE-ROOT/2.1.0.1/include On this machine the CLHEP_LIB_DIR=/home/jahdasa/GATE-ROOT/2.1.0.1/lib On this machine the CLHEP_LIB=CLHEP On this machine the G4UI_USE_TCSH=1 On this machine the G4VIS_BUILD_OPENGLX_DRIVER=1 On this machine the G4VIS_BUILD_RAYTRACERX_DRIVER=1 On this machine the G4VIS_USE_OPENGLX=1 On this machine the G4VIS_USE_RAYTRACERX=1 On this machine the XMFLAGS= On this machine the XMLIBS= On this machine the XMFLAGS= On this machine the XAWFLAGS= On this machine the XAWLIBS= On this machine the G4LIB_BUILD_SHARED=1 On this machine the G4LIB_BUILD_STATIC=1 Configuring GATE options G4WORKDIR set to . G4TMP set to ./tmp G4BIN set to ./bin Data analysis and output features enabled Ascii data output enabled Transport and generation of optical photons is disabled Checking your LD_LIBRARY_PATH variable... ==> OK: /home/jahdasa/GATE-ROOT/root/lib is already in your LD_LIBRARY_PATH Use of ROOT enabled ROOT real-time plotter disabled LMF data output disabled ECAT7 data output disabled GATEHOME is set to /home/jahdasa/GATE-ROOT/gate_v6.1 Checking your path variable... ==> OK: /home/jahdasa/GATE-ROOT/gate_v6.1/bin/Linux-g++ added to your path variable Checking your LD_LIBRARY_PATH variable... ==> OK: /home/jahdasa/GATE-ROOT/gate_v6.1/tmp/Linux-g++/Gate added to your path variable G4VERSION9_3 is set: GATE is compatible with the GEANT4 version 9.3 and 9.4 Done On this machine the G4SYSTEM=Linux-g++ On this machine the G4INSTALL=/home/jahdasa/GATE-ROOT/geant4_9_4_p03 On this machine the G4LIB=/home/jahdasa/GATE-ROOT/geant4_9_4_p03/lib On this machine the G4LEVELGAMMADATA=/home/jahdasa/GATE-ROOT/geant4_9_4_p03/data/PhotonEvaporation2.1 On this machine the G4RADIOACTIVEDATA=/home/jahdasa/GATE-ROOT/geant4_9_4_p03/data/RadioactiveDecay3.3 On this machine the G4LEDATA=/home/jahdasa/GATE-ROOT/geant4_9_4_p03/data/G4EMLOW6.19 On this machine the G4NEUTRONHPDATA=/home/jahdasa/GATE-ROOT/geant4_9_4_p03/data/G4NDL3.14 On this machine the G4ABLADATA=/home/jahdasa/GATE-ROOT/geant4_9_4_p03/data/G4ABLA3.0 On this machine the G4REALSURFACEDATA=/home/jahdasa/GATE-ROOT/geant4_9_4_p03/data/RealSurface1.0 On this machine the G4NEUTRONXSDATA=/home/jahdasa/GATE-ROOT/geant4_9_4_p03/data/G4NEUTRONXS1.0 On this machine the G4PIIDATA=/home/jahdasa/GATE-ROOT/geant4_9_4_p03/data/G4PII1.2 On this machine the CLHEP_BASE_DIR=/home/jahdasa/GATE-ROOT/2.1.0.1 On this machine the CLHEP_INCLUDE_DIR=/home/jahdasa/GATE-ROOT/2.1.0.1/include On this machine the CLHEP_LIB_DIR=/home/jahdasa/GATE-ROOT/2.1.0.1/lib On this machine the CLHEP_LIB=CLHEP On this machine the G4UI_USE_TCSH=1 On this machine the G4VIS_BUILD_OPENGLX_DRIVER=1 On this machine the G4VIS_BUILD_RAYTRACERX_DRIVER=1 On this machine the G4VIS_USE_OPENGLX=1 On this machine the G4VIS_USE_RAYTRACERX=1 On this machine the XMFLAGS= On this machine the XMLIBS= On this machine the XMFLAGS= On this machine the XAWFLAGS= On this machine the XAWLIBS= On this machine the G4LIB_BUILD_SHARED=1 On this machine the G4LIB_BUILD_STATIC=1 jahdasa@ubuntu:~$ cd /home/jahdasa/GATE-ROOT/gate_v6.1/examples/example_SPECT/ jahdasa@ubuntu:~/GATE-ROOT/gate_v6.1/examples/example_SPECT$ Gate [G4] [G4] ************************************************************* [G4] Geant4 version Name: geant4-09-04-patch-03 (9-December-2011) [G4] Copyright : Geant4 Collaboration [G4] Reference : NIM A 506 (2003), 250-303 [G4] WWW : http://cern.ch/geant4 [G4] ************************************************************* [G4] [Core-0] Initialization of geometry [Core-0] Initialization of physics [Core-0] Initialization of actors [Core-0] [Core-0] ********************************************************************** [Core-0] GATE version name: gate_v6.1 [Core-0] Copyright : OpenGATE Collaboration [Core-0] Reference : Phys. Med. Biol. 49 (2004) 4543-4561 [Core-0] Reference : Phys. Med. Biol. 56 (2011) 881-901 [Core-0] WWW : http://www.opengatecollaboration.org/ [Core-0] ********************************************************************** [Core-0] Idle> control/execute SPECT.mac parameter value is not listed in the candidate List. ***** Illegal parameter (0) ***** ***** Batch is interrupted!! ***** GateDetectorConstruction::insertARFSD entered created a ARF Sensivitive Detector created command /gate/systems/SPECThead/arf/setARFStage GetDirectoryName()+ setHeight = /gate/hole/geometry/setHeight Translation speed = 0 0 0.04 cm/s Translation speed = 0 0 0.04 cm/s GATE object: 'systems/SPECThead' Components: GATE object: 'systems/SPECThead/base' Attached to volume: SPECThead Nb of children: 1 GATE object: 'systems/SPECThead/crystal' Attached to volume: crystal Nb of children: 1 GATE object: 'systems/SPECThead/pixel' Attached to volume: --- List of Enabled processes: === Process: RayleighScattering === Particle: gamma * Model(s): - PenelopeModel === Process: PhotoElectric === Particle: gamma * Model(s): - StandardModel === Process: MultipleScattering === Particle: e- === Process: ElectronIonisation === Particle: e+ * Model(s): - *** Warning *** No model selected! Particle: e- * Model(s): - StandardModel === Process: Compton === Particle: gamma * Model(s): - PenelopeModel === Process: Bremsstrahlung === Particle: e+ * Model(s): - *** Warning *** No model selected! Particle: e- * Model(s): - StandardModel List of initialized processes: [Core-0] Initialization of geometry [Core-0] Initialization of physics [Core-0] Initialization of actors > *****OMMAND NOT FOUND < ***** Batch is interrupted!! ***** Nb of children: 0 Confirming confinement to volume 'movsource_phys'... > *****OMMAND NOT FOUND < ***** Batch is interrupted!! ***** [Acquisition-0] [Acquisition-0] ============= Source initialization ============= [Acquisition-0] [Acquisition-0] ============= Acquisition starts! ============= [Acquisition-0] Simulation start time = 0 sec [Acquisition-0] Simulation end time = 600 sec [Acquisition-0] Simulation will have = 16 run(s) --------- Ranlux engine status --------- Initial seed = 123456789 randoms[] = 0.366829 0.959976 0.382801 0.71216 0.91131 0.29693 0.806733 0.788568 0.684343 0.334206 0.0928262 0.66146 carry = 0, index = 11 luxury = 1 pDiscard = 87 ---------------------------------------- [Acquisition-0] [Acquisition-0] Slice 0 from 0 to 37.5 s [slice=37.5 s], final stop at 600 s. ### WARNING: G4UrbanMscModel90 model is used for e- !!! ### This model should be used only for heavy particles RayleighScattering: for gamma SubType= 11 Lambda tables from 100 eV to 10 TeV in 200 bins, spline: 1 ===== EM models for the G4Region DefaultRegionForTheWorld ====== PenRayleigh : Emin= 0 eV Emax= 100 GeV PhotoElectric: for gamma SubType= 12 ===== EM models for the G4Region DefaultRegionForTheWorld ====== PhotoElectric : Emin= 0 eV Emax= 10 TeV Compton: for gamma SubType= 13 Lambda tables from 100 eV to 10 TeV in 77 bins, spline: 1 ===== EM models for the G4Region DefaultRegionForTheWorld ====== PenCompton : Emin= 0 eV Emax= 10 TeV MultipleScattering: for e- SubType= 10 Lambda tables from 100 eV to 10 TeV in 77 bins, spline: 1 RangeFactor= 0.2, stepLimitType: 0, latDisplacement: 1 ===== EM models for the G4Region DefaultRegionForTheWorld ====== UrbanMsc90 : Emin= 0 eV Emax= 10 TeV ElectronIonisation: for e- SubType= 2 dE/dx and range tables from 100 eV to 10 TeV in 77 bins Lambda tables from threshold to 10 TeV in 77 bins, spline: 1 finalRange(mm)= 1, dRoverRange= 0.2, integral: 1, fluct: 1, linLossLimit= 0.01 ===== EM models for the G4Region DefaultRegionForTheWorld ====== MollerBhabha : Emin= 0 eV Emax= 10 TeV Bremsstrahlung: for e- SubType= 3 dE/dx and range tables from 100 eV to 10 TeV in 77 bins Lambda tables from threshold to 10 TeV in 77 bins, spline: 1 LPM flag: 1 for E > 1 GeV ===== EM models for the G4Region DefaultRegionForTheWorld ====== eBrem : Emin= 0 eV Emax= 1 GeV AngularGenUrban eBremLPM : Emin= 1 GeV Emax= 10 TeV AngularGenUrban ElectronIonisation: for e+ SubType= 2 dE/dx and range tables from 100 eV to 10 TeV in 77 bins Lambda tables from threshold to 10 TeV in 77 bins, spline: 1 finalRange(mm)= 1, dRoverRange= 0.2, integral: 1, fluct: 1, linLossLimit= 0.01 ===== EM models for the G4Region DefaultRegionForTheWorld ====== MollerBhabha : Emin= 0 eV Emax= 10 TeV Bremsstrahlung: for e+ SubType= 3 dE/dx and range tables from 100 eV to 10 TeV in 77 bins Lambda tables from threshold to 10 TeV in 77 bins, spline: 1 LPM flag: 1 for E > 1 GeV ===== EM models for the G4Region DefaultRegionForTheWorld ====== eBrem : Emin= 0 eV Emax= 1 GeV AngularGenUrban eBremLPM : Emin= 1 GeV Emax= 10 TeV AngularGenUrban clearing up the projection data matrices ... done WARNING: Scene "refresh" not found. /vis/scene/list to see scenes. ERROR: G4VisCommandsViewerUpdate::SetNewValue: no current viewer. [Acquisition-0] [Acquisition-0] Slice 1 from 37.5 to 75 s [slice=37.5 s], final stop at 600 s. clearing up the projection data matrices ... done WARNING: Scene "refresh" not found. /vis/scene/list to see scenes. ERROR: G4VisCommandsViewerUpdate::SetNewValue: no current viewer. [Acquisition-0] [Acquisition-0] Slice 2 from 75 to 112.5 s [slice=37.5 s], final stop at 600 s. clearing up the projection data matrices ... done WARNING: Scene "refresh" not found. /vis/scene/list to see scenes. ERROR: G4VisCommandsViewerUpdate::SetNewValue: no current viewer. [Acquisition-0] [Acquisition-0] Slice 3 from 112.5 to 150 s [slice=37.5 s], final stop at 600 s. clearing up the projection data matrices ... done WARNING: Scene "refresh" not found. /vis/scene/list to see scenes. ERROR: G4VisCommandsViewerUpdate::SetNewValue: no current viewer. [Acquisition-0] [Acquisition-0] Slice 4 from 150 to 187.5 s [slice=37.5 s], final stop at 600 s. clearing up the projection data matrices ... done WARNING: Scene "refresh" not found. /vis/scene/list to see scenes. ERROR: G4VisCommandsViewerUpdate::SetNewValue: no current viewer. [Acquisition-0] [Acquisition-0] Slice 5 from 187.5 to 225 s [slice=37.5 s], final stop at 600 s. clearing up the projection data matrices ... done WARNING: Scene "refresh" not found. /vis/scene/list to see scenes. ERROR: G4VisCommandsViewerUpdate::SetNewValue: no current viewer. [Acquisition-0] [Acquisition-0] Slice 6 from 225 to 262.5 s [slice=37.5 s], final stop at 600 s. clearing up the projection data matrices ... done WARNING: Scene "refresh" not found. /vis/scene/list to see scenes.