<div>Hi,</div> <div> </div> <div>Does anyone use MS Visual C++ 2008 instead of 2005 for the compiler?</div> <div> </div> <div>The newest Geant4 installation guide for PC suggests to use the 2008 Ed. One benefit is that it eliminates the need to install MS Windows Server 2003 Platform SDK.</div> <div> </div> <div>I was able to succesfully install the Geant4 using MS Visual C++ 2008 months ago. I am currently trying to install the GATE on my PC. Since the GATE installation guide suggests some codes editting involving MS Windows Server Platform SDK, I am wondering if I can use MS Visual C++ 2008 without MS Windows Server. Any "heads-up" will be much appreciated.</div> <div> </div> <div>Thank you in advance for your help.</div> <div> </div> <div>best,</div> <div> </div> <div>Siman</div> <div>Graduate Student in Medical Physics</div> <div>Columbia University </div> <div class="gmail_quote">On Tue, Aug 25, 2009 at 12:14 PM, <<a href="mailto:gate-users-request@lists.healthgrid.org">gate-users-request@lists.healthgrid.org</a>> wrote: <blockquote style="BORDER-LEFT: #ccc 1px solid; MARGIN: 0px 0px 0px 0.8ex; PADDING-LEFT: 1ex" class="gmail_quote">Send Gate-users mailing list submissions to <a href="mailto:gate-users@lists.healthgrid.org">gate-users@lists.healthgrid.org</a> To subscribe or unsubscribe via the World Wide Web, visit <a href="http://lists.healthgrid.org/mailman/listinfo/gate-users" target="_blank">http://lists.healthgrid.org/mailman/listinfo/gate-users</a> or, via email, send a message with subject or body 'help' to <a href="mailto:gate-users-request@lists.healthgrid.org">gate-users-request@lists.healthgrid.org</a> You can reach the person managing the list at <a href="mailto:gate-users-owner@lists.healthgrid.org">gate-users-owner@lists.healthgrid.org</a> When replying, please edit your Subject line so it is more specific than "Re: Contents of Gate-users digest..." Today's Topics: 1. ion_source definition... (AliAsghar Parach) 2. Re: compilation of Gate 5.0.0 (Cui, Yonggang) ---------------------------------------------------------------------- Message: 1 Date: Tue, 25 Aug 2009 15:16:32 +0430 From: AliAsghar Parach <<a href="mailto:aaparach@gmail.com">aaparach@gmail.com</a>> Subject: [Gate-users] ion_source definition... To: <a href="mailto:gate-users-request@lists.healthgrid.org">gate-users-request@lists.healthgrid.org</a>, <a href="mailto:Gate-users@lists.healthgrid.org">Gate-users@lists.healthgrid.org</a> Message-ID: <<a href="mailto:ebd3a0160908250346l1f75a92cy4df736f9b9981cfb@mail.gmail.com">ebd3a0160908250346l1f75a92cy4df736f9b9981cfb@mail.gmail.com</a>> Content-Type: text/plain; charset="iso-8859-1" Daer all users, I defined Lu-177(with all of it's emissions) in GATE4.0.0 and I set all of relevant parameters for it. at first, I set G4LEVELGAMMADATA as following: export G4LEVELGAMMADATA=/g4/GATE4/geant4.9.1.p02/data/PhotonEvaporation2.0 The commands for definition of Lu-177 ion source are in below: /gate/source/addSource LuSource /gate/source/LuSource/setActivity 10000. becquerel /gate/source/LuSource/gps/particle ion /gate/source/LuSource/gps/ion 71 177 0 0 /gate/source/LuSource/gps/energytype Mono /gate/source/LuSource/gps/monoenergy 0. keV /gate/source/LuSource/gps/number 1 /gate/source/LuSource/setForcedUnstableFlag true /gate/source/LuSource/setForcedHalfLife 581472. s /gate/source/LuSource/gps/type Point /gate/source/LuSource/gps/angtype iso /gate/source/LuSource/gps/mintheta 0. deg /gate/source/LuSource/gps/maxtheta 180. deg /gate/source/LuSource/gps/minphi 0. deg /gate/source/LuSource/gps/maxphi 360. deg /gate/source/LuSource/gps/centre 0. 0. 0. cm /gate/source/LuSource/gps/confine NULL /gate/source/list but GATE didn't recognized any source in the running page and shows the following error and complete the simulation without any source. parameter value is not listed in the candidate List. > *****llegal parameter (1) </gate/source/gamma/setActivity 10000. becquerel what is the reason of this effect? note: when i use gamma point source (not ion source) the GATE runs well. regards -- Ali Asghar Parach,Ph.D. student in Medical Physics,Tarbiat Modares University,Tehran,Iran -------------- next part -------------- An HTML attachment was scrubbed... URL: <<a href="http://lists.healthgrid.org/archives/gate-users/attachments/20090825/d68233da/attachment-0001.htm" target="_blank">http://lists.healthgrid.org/archives/gate-users/attachments/20090825/d68233da/attachment-0001.htm</a>> ------------------------------ Message: 2 Date: Tue, 25 Aug 2009 11:08:07 -0400 From: "Cui, Yonggang" <<a href="mailto:ycui@bnl.gov">ycui@bnl.gov</a>> Subject: Re: [Gate-users] compilation of Gate 5.0.0 To: "Simon Stute" <<a href="mailto:gate.stute@gmail.com">gate.stute@gmail.com</a>>, Ida H?ggstr?m <<a href="mailto:ida.haggstrom@radfys.umu.se">ida.haggstrom@radfys.umu.se</a>> Cc: <a href="mailto:gate-users@lists.healthgrid.org">gate-users@lists.healthgrid.org</a> Message-ID: <<a href="mailto:85FA28559CB0734FA6AABF430740D7A503A9D896@exchangemb2.bnl.gov">85FA28559CB0734FA6AABF430740D7A503A9D896@exchangemb2.bnl.gov</a>> Content-Type: text/plain; charset="iso-8859-1" Dear All, I fixed the problem by unzip GATE 5 to a brand new folder, then go to the folder, modify the env_gate.sh, source it, unset G4WORKDIR, and go. In this way, everything is okay. Yonggang ________________________________ From: Simon Stute [mailto:<a href="mailto:gate.stute@gmail.com">gate.stute@gmail.com</a>] Sent: Tuesday, August 25, 2009 3:57 AM To: Ida H?ggstr?m Cc: Cui, Yonggang; <a href="mailto:gate-users@lists.healthgrid.org">gate-users@lists.healthgrid.org</a> Subject: Re: [Gate-users] compilation of Gate 5.0.0 Hi, As a non-durty solution you can set G4WORKDIR to ./ (I think it is the default) and you add $GATEHOME/tmp/bin/Linux-g++ to your LD_LIBRARY_PATH. That's it ! Cheers, Simon 2009/8/24 Ida H?ggstr?m <<a href="mailto:ida.haggstrom@radfys.umu.se">ida.haggstrom@radfys.umu.se</a>> Hello again! I found another solution that I think works just as well, maybe even a better idea! Instead of changing the G4TMP and G4BIN in your make-files, type "make" once first so you get the error about not finding libGate.so.... Look in your gate home directory under temp (gate_v5.0.0/tmp/Linux-g++/Gate) where you should hopefully find a bunch of files, including libGate.so. Copy all those files and move to your working directory under the same path: G4Work/tmp/Linux-g+/Gate. type "make" in your terminal again and I think it should work! It now find all those files... anyway, you should get the executable file "Gate" in your working directory under bin/Linux-g++ I think. You have to copy the libGate.so file into that same directory otherwise it will not be found when trying to run Gate... hope this helps! worked for me anyways! Ida Den 24 augusti 2009 08.15 skrev Ida H?ggstr?m <<a href="mailto:ida.haggstrom@radfys.umu.se">ida.haggstrom@radfys.umu.se</a>>: Hi Yonggang! I encountered the exact same error when I tried to compile Gate 5.0.0... (could not find libGate.so). I noticed that the compilation of the subdirs (arf, physics, management etc) was ok and that all those .o-files ended up in my G4INSTALL directory under G4INSTALL/tmp/Linux-g++/Gate. If you open the GATE GNUMakefile that you run you see that G4TMP and G4BIN paths are set to your working directory by default (at least for me): G4WORKDIR/tmp G4WORKDIR/bin When compiling I think it looks there for the just created .o-files! Anyway, I changed those paths to G4INSTALL/tmp G4INSTALL/bin In all the subdirs (arf, physics etc) there's another makefile where G4TMP and G4BIN are defined again (don't know why!). I simply commented those commands so I only had to set them in the main make-file and everything compiled without problems for me... Good luck! Ida 2009/8/22 Cui, Yonggang <<a href="mailto:ycui@bnl.gov">ycui@bnl.gov</a>> Hi All, I have compiled GATE 4.0.0 successfully before. Today, I tried to install GATE 5.0.0. When I compile it, I got the following errors: *************************************************** Making dependency for file Gate.cc ... In file included from ./source/mandatory_G4_classes/include/GateSteppingAction.h h:34, from Gate.cc:34: ./source/output/include/GateTrack.hh:10:19: TROOT.h: No such file or directory ./source/output/include/GateTrack.hh:11:19: TTree.h: No such file or directory Entering source/arf ... make[1]: Nothing to be done for `obj'. source/arf finished Entering source/geometry ... make[1]: Nothing to be done for `obj'. source/geometry finished Entering source/digitizer ... make[1]: Nothing to be done for `obj'. source/digitizer finished Entering source/output ... make[1]: Nothing to be done for `obj'. source/output finished Entering source/physics ... make[1]: Nothing to be done for `obj'. source/physics finished Entering source/voxel ... make[1]: Nothing to be done for `obj'. source/voxel finished Entering source/mandatory_G4_classes ... make[1]: Nothing to be done for `obj'. source/mandatory_G4_classes finished Entering source/management ... make[1]: Nothing to be done for `obj'. source/management finished Creating shared library /home1/ycui/G4Work/tmp/Linux-g++/Gate/libGate.so ... g++: *.o: No such file or directory make: *** [/home1/ycui/G4Work/tmp/Linux-g++/Gate/libGate.so] Error 1 **************************************************** It seems that GateTrack.hh is a new header file introduced in Gate 5.0.0. How can I correct the error? Thanks in advance. Yonggang _______________________________________________ Gate-users mailing list <a href="mailto:Gate-users@lists.healthgrid.org">Gate-users@lists.healthgrid.org</a> <a href="http://lists.healthgrid.org/mailman/listinfo/gate-users" target="_blank">http://lists.healthgrid.org/mailman/listinfo/gate-users</a> _______________________________________________ Gate-users mailing list <a href="mailto:Gate-users@lists.healthgrid.org">Gate-users@lists.healthgrid.org</a> <a href="http://lists.healthgrid.org/mailman/listinfo/gate-users" target="_blank">http://lists.healthgrid.org/mailman/listinfo/gate-users</a> -------------- next part -------------- An HTML attachment was scrubbed... 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