Dear Cheick, and all<div><br></div><div>Thank you very much for your advice!</div><div>I could have installed gate_v5.0.0, by trying with root_v5.14 !<br><br></div><div>However, I have had a new trouble, since I tried to benchmarkPET.</div> <div>But, I found out that "PATH" is not so good, because of the following error:</div><div><div><br></div><div><div>dyld: Library not loaded: libCLHEP-2.0.4.2.dylib</div><div> Referenced from: /Applications/gate_v5.0.0/bin/Darwin-g++/Gate</div> <div> Reason: image not found</div><div>Trace/BPT trap</div><div><br></div></div><div>So, I wrote at ~/.bashrc:</div><div><br></div><div>## ROOT</div><div><div>export ROOTSYS=/usr/local/root</div><div>export PATH=$ROOTSYS/bin:$PATH</div> <div>export LD_LIBRARY_PATH=$ROOTSYS/lib:$LD_LIBRARY_PATH</div><div>export DYLD_LIBRARY_PATH=$ROOTSYS/lib:$DYLD_LIBRARY_PATH</div></div><div>## CLHEP</div><div><div>export PATH=$CLHEP/bin:$PATH</div><div>export LD_LIBRARY_PATH=/Applications/CLHEP/lib</div> <div>export DYLD_LIBRARY_PATH=/Applications/CLHEP/lib</div><div><br></div><div>and after ' source ~/.bashrc ' </div><div>I ran benchmarkPET.mac then I had errors:</div><div><br></div></div><div><div>dyld: Library not loaded: /Users/brun/root/lib/libCore.dylib</div> <div> Referenced from: /Applications/gate_v5.0.0/bin/Darwin-g++/Gate</div><div> Reason: image not found</div><div>Trace/BPT trap</div></div><div><br></div><div>Who is "brun" ?????</div><div>There is no accounts for "brun".</div> <div><br></div><div>comment out at ~/.bashrc by follows:</div><div><br></div><div><div>export PATH=$CLHEP/bin:$PATH</div><div>#export LD_LIBRARY_PATH=/Applications/CLHEP/lib</div><div>#export DYLD_LIBRARY_PATH=/Applications/CLHEP/lib</div> <div><br></div><div>and after ' source ~/.bashrc ' </div><div>I ran benchmarkPET.mac.</div><div><br></div></div><div>Then I got a visualization like a attachment (pic11)</div><div>but, have a error as following:</div> <div><br></div><div>WARNING: G4VisManager::EndOfEvent: Event keeping suspended.</div><div> The number of events exceeds the maximum that may be kept, 100.</div><div><br></div><div><br></div><div>Best regards,</div><div><br> </div><div>Taka.</div><div><br></div><div><br></div></div><div><div class="gmail_quote">2009/6/23 THIAM Cheick 219838 <span dir="ltr"><<a href="mailto:cheick.thiam@cea.fr">cheick.thiam@cea.fr</a>></span><br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex;"> <div lang="FR" link="blue" vlink="blue"> <div> <p><font size="2" color="#3366ff" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:#3366FF">Oky G4 is done </span></font></p> <p style="text-autospace:none"><font size="2" color="#3366ff" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:#3366FF"> </span></font></p> <p style="text-autospace:none"><font size="2" color="#3366ff" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:#3366FF">I think the problem probably comes from version incompatibility... (gcc, root) the recents versions of root are not often stable for Mac-OS can you try with a old version of root ? Per example root_v5.14 for Moc-OS. I use this version with gate_v5 and geant4.9.2 on my Mac-OS and it's run correctly...</span></font></p> <p style="text-autospace:none"><font size="2" color="#3366ff" face="Arial"><span style="font-size:10.0pt;font-family:Arial;color:#3366FF"> </span></font></p> <p style="text-autospace:none"><font size="2" color="#3366ff" face="Arial"><span style="font-size:10.0pt;font-family:Arial;color:#3366FF">Cheick</span></font></p> <p><font size="2" color="navy" face="Arial"><span style="font-size:10.0pt;font-family:Arial;color:navy"> </span></font></p> <p><font size="2" color="navy" face="Arial"><span style="font-size:10.0pt;font-family:Arial;color:navy"> </span></font></p> <div> <div align="center" style="text-align:center"><font size="3" face="Times New Roman"><span style="font-size:12.0pt"> <hr size="2" width="100%" align="center"> </span></font></div> <p><b><font size="2" face="Tahoma"><span style="font-size:10.0pt;font-family:Tahoma;font-weight:bold">De :</span></font></b><font size="2" face="Tahoma"><span style="font-size:10.0pt;font-family:Tahoma"> <a href="mailto:takatoshi.higashi@gmail.com" target="_blank">takatoshi.higashi@gmail.com</a> [mailto:<a href="mailto:takatoshi.higashi@gmail.com" target="_blank">takatoshi.higashi@gmail.com</a>] <b><span style="font-weight:bold">De la part de</span></b> Takatoshi HIGASHI<br> <b><span style="font-weight:bold">Envoyé :</span></b> mardi 23 juin 2009 12:38<br> <b><span style="font-weight:bold">À :</span></b> THIAM Cheick 219838</span></font></p><font size="2" face="Tahoma"><div><div></div><div class="h5"><br> <b><span style="font-weight:bold">Objet :</span></b> Re: [Gate-users] installing Gate 5.0.0 on Mac OS X 10.5.7</div></div></font><p></p> </div><div><div></div><div class="h5"> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt"> </span></font></p> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">Dear Cheick</span></font></p> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt"> </span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">I checked them by running example/novice in geant4, <br> I attached their make.log and a picture(exampleN07 sample.mac run).</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">Geant4 runs correctly, I think.</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt"> </span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">Taka</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt"> </span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt"> </span></font></p> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">2009/6/23 THIAM Cheick 219838 <<a href="mailto:cheick.thiam@cea.fr" target="_blank">cheick.thiam@cea.fr</a>></span></font></p> <div link="blue" vlink="blue"> <div> <p><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy">Hello,</span></font></p> <p><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy"> </span></font></p> <p><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy">Are you sure your installations are well done in your env… geant4, CLHEP and ROOT… </span></font></p> <p><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy">Are that single geant4 run correctly?</span></font></p> <p><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy"> </span></font></p> <p><font size="2" color="navy" face="Arial"><span lang="EN-GB" style="font-size:10.0pt;font-family:Arial;color:navy">Cheick</span></font></p> <div> <div align="center" style="text-align:center"><font size="3" face="Times New Roman"><span style="font-size:12.0pt"> <hr size="2" width="100%" align="center"> </span></font></div> <p><b><font size="2" face="Tahoma"><span style="font-size:10.0pt;font-family:Tahoma;font-weight:bold">De :</span></font></b><font size="2" face="Tahoma"><span style="font-size:10.0pt;font-family:Tahoma"> <a href="mailto:gate-users-bounces@lists.healthgrid.org" target="_blank">gate-users-bounces@lists.healthgrid.org</a> [mailto:<a href="mailto:gate-users-bounces@lists.healthgrid.org" target="_blank">gate-users-bounces@lists.healthgrid.org</a>] <b><span style="font-weight:bold">De la part de</span></b> Takatoshi HIGASHI<br> <b><span style="font-weight:bold">Envoyé :</span></b> lundi 22 juin 2009 19:28<br> <b><span style="font-weight:bold">À :</span></b> <a href="mailto:gate-users@lists.healthgrid.org" target="_blank">gate-users@lists.healthgrid.org</a><br> <b><span style="font-weight:bold">Objet :</span></b> Re: [Gate-users] installing Gate 5.0.0 on Mac OS X 10.5.7</span></font></p> </div> <div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt"> </span></font></p> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">Dear all,</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt"> </span></font></p> </div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">The make.log file is attached.</span></font></p> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt"> </span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">Thanks,</span></font></p> </div> <div> <p style="margin-bottom:12.0pt"><font size="3" face="Times New Roman"><span style="font-size:12.0pt">Taka</span></font></p> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">2009/6/22 Takatoshi HIGASHI <<a href="mailto:higashi@hp2.phys.saga-u.ac.jp" target="_blank">higashi@hp2.phys.saga-u.ac.jp</a>></span></font></p> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">Dear all,</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt"> </span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">Trying to install Gate 5.0.0 with Geant4.9.2.p01 on Mac OS X 10.5.7, but have some trouble while the make process, because of it seems not to recognize a c++ library as the following:</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt"> </span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">.</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">.</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">(Making processes)</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">.</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">.</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">Compiling GateARFDataToRoot.cc ...</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">/usr/include/c++/4.0.0/cmath:99: error: '::acos' has not been declared </span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">/usr/include/c++/4.0.0/cmath:116: error: '::asin' has not been declared</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">/usr/include/c++/4.0.0/cmath:131: error: '::atan' has not been declared</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">.</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">.</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">(lots of errors)</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">.</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">.</span></font></p> </div> <div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">make[1]: *** [../../tmp/Darwin-g++/Gate/GateAnalysis.o] Error 1</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">source/management finished</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">Creating/replacing object files in ./tmp/Darwin-g++/Gate/libGate.a ...</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">ar: creating archive ./tmp/Darwin-g++/Gate/libGate.a</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">ar: ./tmp/Darwin-g++/Gate/*.o: No such file or directory</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">make: *** [tmp/Darwin-g++/Gate/libGate.a] Error 1</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt"> </span></font></p> </div> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">(finish)</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt"> </span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">I commanded as follows:</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt"> </span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">$ source ($geant4.9.2.p1 directory)/env.sh</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">$ source ($gate5.0.0 directory)/env_gate.sh</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">$ make</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt"> </span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">@ gcc version 4.0.1 (Apple Inc. build 5465)</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">and X11 was installed with Xcode from ADC.</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt"> </span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">geant4.9.2.p01 and ROOT 5.19/02 seem to run fine on their own.</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">(Of course, installations too.)</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt"> </span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt">I'd like to have some advice.</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt"><br> Best wishes,<br> Taka</span></font></p> </div> <div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt"> </span></font></p> </div> <p><font size="3" color="#888888" face="Times New Roman"><span style="font-size:12.0pt;color:#888888">-- <br> Takatoshi HIGASHI<br> High Energy Physics Group, Department of Physics,<br> Graduate School of Scinence & Engineering, Saga University<br> <a href="mailto:E-mail%3Ahigashi@hp2.phys.saga-u.ac.jp" target="_blank">E-mail:higashi@hp2.phys.saga-u.ac.jp</a><br> TEL/FAX:0952-28-8545</span></font></p> </div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt"><br> <br clear="all"> <br> -- <br> Takatoshi HIGASHI<br> High Energy Physics Group, Department of Physics,<br> Graduate School of Scinence & Engineering, Saga University<br> <a href="mailto:E-mail%3Ahigashi@hp2.phys.saga-u.ac.jp" target="_blank">E-mail:higashi@hp2.phys.saga-u.ac.jp</a><br> TEL/FAX:0952-28-8545</span></font></p> </div> </div> </div> </div> </div> </div> <p><font size="3" face="Times New Roman"><span style="font-size:12.0pt"><br> <br clear="all"> <br> -- <br> Takatoshi HIGASHI<br> High Energy Physics Group, Department of Physics,<br> Graduate School of Scinence & Engineering, Saga University<br> <a href="mailto:E-mail%3Ahigashi@hp2.phys.saga-u.ac.jp" target="_blank">E-mail:higashi@hp2.phys.saga-u.ac.jp</a><br> TEL/FAX:0952-28-8545</span></font></p> </div> </div></div></div> </div> </blockquote></div><br><br clear="all"><br>-- <br>Takatoshi HIGASHI<br>High Energy Physics Group, Department of Physics,<br> Graduate School of Scinence & Engineering, Saga University<br><a href="mailto:E-mail%3Ahigashi@hp2.phys.saga-u.ac.jp">E-mail:higashi@hp2.phys.saga-u.ac.jp</a><br> TEL/FAX:0952-28-8545<br> </div>